Sodium in PDB 6uof: 1.2 Angstrom Resolution Crystal Structure of Cbs Domains of Transcriptional Regulator From Streptococcus Pneumoniae

Protein crystallography data

The structure of 1.2 Angstrom Resolution Crystal Structure of Cbs Domains of Transcriptional Regulator From Streptococcus Pneumoniae, PDB code: 6uof was solved by G.Minasov, L.Shuvalova, I.Dubrovska, O.Kiryukhina, M.Endres, K.J.F.Satchell, Center For Structural Genomics Of Infectious Diseases(Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.11 / 1.20
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 27.313, 42.872, 89.098, 90.00, 90.00, 90.00
R / Rfree (%) 16.7 / 18.6

Other elements in 6uof:

The structure of 1.2 Angstrom Resolution Crystal Structure of Cbs Domains of Transcriptional Regulator From Streptococcus Pneumoniae also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Sodium Binding Sites:

The binding sites of Sodium atom in the 1.2 Angstrom Resolution Crystal Structure of Cbs Domains of Transcriptional Regulator From Streptococcus Pneumoniae (pdb code 6uof). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the 1.2 Angstrom Resolution Crystal Structure of Cbs Domains of Transcriptional Regulator From Streptococcus Pneumoniae, PDB code: 6uof:

Sodium binding site 1 out of 1 in 6uof

Go back to Sodium Binding Sites List in 6uof
Sodium binding site 1 out of 1 in the 1.2 Angstrom Resolution Crystal Structure of Cbs Domains of Transcriptional Regulator From Streptococcus Pneumoniae


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of 1.2 Angstrom Resolution Crystal Structure of Cbs Domains of Transcriptional Regulator From Streptococcus Pneumoniae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na402

b:28.6
occ:1.00
O A:ASN218 2.3 15.1 1.0
O A:HOH584 2.3 19.7 1.0
O A:HOH523 2.3 16.1 1.0
O A:HOH597 2.4 26.4 1.0
C A:ASN218 3.4 14.7 1.0
NH1 A:ARG194 3.4 18.7 0.3
OG A:SER220 3.8 17.4 1.0
CA A:ASN218 3.9 14.4 1.0
CB A:ASN218 3.9 13.4 1.0
N A:ARG219 4.6 14.7 1.0
CZ A:ARG194 4.7 17.9 0.3
O A:TYR199 4.7 13.0 1.0
C A:ARG219 4.8 15.0 1.0
CG A:ASN218 4.8 13.6 1.0
CB A:ARG219 4.8 16.0 0.5
CB A:SER220 4.8 15.2 1.0
O A:GLU198 4.8 14.7 1.0
O A:HOH562 4.9 20.1 1.0
O A:ARG219 4.9 15.5 1.0
N A:SER220 5.0 14.7 1.0
CA A:ARG219 5.0 15.3 0.5

Reference:

G.Minasov, L.Shuvalova, I.Dubrovska, O.Kiryukhina, M.Endres, K.J.F.Satchell, Center For Structural Genomics Of Infectious Diseases(Csgid). 1.2 Angstrom Resolution Crystal Structure of Cbs Domains of Transcriptional Regulator From Streptococcus Pneumoniae To Be Published.
Page generated: Tue Dec 15 14:32:37 2020

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