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Atomistry » Sodium » PDB 6ooi-6p8l » 6p8k | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Atomistry » Sodium » PDB 6ooi-6p8l » 6p8k » |
Sodium in PDB 6p8k: Escherichia Coli Bacterioferritin Substituted with Zinc Protoporphyrin IXEnzymatic activity of Escherichia Coli Bacterioferritin Substituted with Zinc Protoporphyrin IX
All present enzymatic activity of Escherichia Coli Bacterioferritin Substituted with Zinc Protoporphyrin IX:
1.16.3.1; Protein crystallography data
The structure of Escherichia Coli Bacterioferritin Substituted with Zinc Protoporphyrin IX, PDB code: 6p8k
was solved by
A.B.Taylor,
D.Cioloboc,
D.M.Kurtz,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Other elements in 6p8k:
The structure of Escherichia Coli Bacterioferritin Substituted with Zinc Protoporphyrin IX also contains other interesting chemical elements:
Sodium Binding Sites:
The binding sites of Sodium atom in the Escherichia Coli Bacterioferritin Substituted with Zinc Protoporphyrin IX
(pdb code 6p8k). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total 4 binding sites of Sodium where determined in the Escherichia Coli Bacterioferritin Substituted with Zinc Protoporphyrin IX, PDB code: 6p8k: Jump to Sodium binding site number: 1; 2; 3; 4; Sodium binding site 1 out of 4 in 6p8kGo back to Sodium Binding Sites List in 6p8k
Sodium binding site 1 out
of 4 in the Escherichia Coli Bacterioferritin Substituted with Zinc Protoporphyrin IX
Mono view Stereo pair view
Sodium binding site 2 out of 4 in 6p8kGo back to Sodium Binding Sites List in 6p8k
Sodium binding site 2 out
of 4 in the Escherichia Coli Bacterioferritin Substituted with Zinc Protoporphyrin IX
Mono view Stereo pair view
Sodium binding site 3 out of 4 in 6p8kGo back to Sodium Binding Sites List in 6p8k
Sodium binding site 3 out
of 4 in the Escherichia Coli Bacterioferritin Substituted with Zinc Protoporphyrin IX
Mono view Stereo pair view
Sodium binding site 4 out of 4 in 6p8kGo back to Sodium Binding Sites List in 6p8k
Sodium binding site 4 out
of 4 in the Escherichia Coli Bacterioferritin Substituted with Zinc Protoporphyrin IX
Mono view Stereo pair view
Reference:
B.S.Benavides,
S.Valandro,
D.Cioloboc,
A.B.Taylor,
K.S.Schanze,
D.M.Kurtz Jr..
Structure of A Zinc Porphyrin-Substituted Bacterioferritin and Photophysical Properties of Iron Reduction. Biochemistry V. 59 1618 2020.
Page generated: Tue Dec 15 12:44:40 2020
ISSN: ISSN 0006-2960 PubMed: 32283930 DOI: 10.1021/ACS.BIOCHEM.9B01103 |
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