Sodium in PDB 6ndn: Crystal Structure of Selenocysteine Lyase From Escherichia Coli

All present enzymatic activity of Crystal Structure of Selenocysteine Lyase From Escherichia Coli:
2.8.1.7; 4.4.1.16;

The structure of Crystal Structure of Selenocysteine Lyase From Escherichia Coli, PDB code: 6ndn was solved by J.F.Scortecci, J.Brandao-Neto, H.M.Pereira, O.H.Thiemann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	57.21 / 1.77
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	126.520, 126.520, 134.091, 90.00, 90.00, 90.00
R / Rfree (%)	16 / 17.3

The binding sites of Sodium atom in the Crystal Structure of Selenocysteine Lyase From Escherichia Coli (pdb code 6ndn). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Selenocysteine Lyase From Escherichia Coli, PDB code: 6ndn:

Sodium binding site 1 out of 1 in the Crystal Structure of Selenocysteine Lyase From Escherichia Coli


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Selenocysteine Lyase From Escherichia Coli within 5.0Å range: probe atom residue distance (Å) B Occ A:Na502 b:25.2 occ:0.50 OE2 A:GLU250 2.3 27.2 1.0 OE1 A:GLU96 2.4 25.6 1.0 CD A:GLU96 3.3 27.1 1.0 CD A:GLU250 3.5 27.8 1.0 CH2 A:TRP249 3.6 25.5 1.0 CZ3 A:TRP249 3.6 24.9 1.0 NH2 A:ARG92 3.8 27.9 1.0 CG A:GLU96 3.8 24.1 1.0 CG A:GLU250 4.3 26.7 1.0 OE2 A:GLU96 4.3 26.6 1.0 OE1 A:GLU250 4.3 29.6 1.0 O A:HOH823 4.4 26.9 1.0 CZ2 A:TRP249 4.5 24.7 1.0 CE3 A:TRP249 4.6 24.9 1.0 CZ A:ARG92 4.8 30.7 1.0

J.F.Scortecci, J.Brandao-Neto, H.M.Pereira, O.H.Thiemann. Crystal Structure of Selenocysteine Lyase From Escherichia Coli To Be Published.