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Atomistry » Sodium » PDB 6d4o-6dmd » 6dlq | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Atomistry » Sodium » PDB 6d4o-6dmd » 6dlq » |
Sodium in PDB 6dlq: Prpp Riboswitch Bound to Prpp, Manganese Chloride Soaked StructureProtein crystallography data
The structure of Prpp Riboswitch Bound to Prpp, Manganese Chloride Soaked Structure, PDB code: 6dlq
was solved by
A.Peselis,
A.Serganov,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Other elements in 6dlq:
The structure of Prpp Riboswitch Bound to Prpp, Manganese Chloride Soaked Structure also contains other interesting chemical elements:
Sodium Binding Sites:
The binding sites of Sodium atom in the Prpp Riboswitch Bound to Prpp, Manganese Chloride Soaked Structure
(pdb code 6dlq). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total 4 binding sites of Sodium where determined in the Prpp Riboswitch Bound to Prpp, Manganese Chloride Soaked Structure, PDB code: 6dlq: Jump to Sodium binding site number: 1; 2; 3; 4; Sodium binding site 1 out of 4 in 6dlqGo back to Sodium Binding Sites List in 6dlq
Sodium binding site 1 out
of 4 in the Prpp Riboswitch Bound to Prpp, Manganese Chloride Soaked Structure
Mono view Stereo pair view
Sodium binding site 2 out of 4 in 6dlqGo back to Sodium Binding Sites List in 6dlq
Sodium binding site 2 out
of 4 in the Prpp Riboswitch Bound to Prpp, Manganese Chloride Soaked Structure
Mono view Stereo pair view
Sodium binding site 3 out of 4 in 6dlqGo back to Sodium Binding Sites List in 6dlq
Sodium binding site 3 out
of 4 in the Prpp Riboswitch Bound to Prpp, Manganese Chloride Soaked Structure
Mono view Stereo pair view
Sodium binding site 4 out of 4 in 6dlqGo back to Sodium Binding Sites List in 6dlq
Sodium binding site 4 out
of 4 in the Prpp Riboswitch Bound to Prpp, Manganese Chloride Soaked Structure
Mono view Stereo pair view
Reference:
A.Peselis,
A.Serganov.
Ykkc Riboswitches Employ An Add-on Helix to Adjust Specificity For Polyanionic Ligands. Nat. Chem. Biol. V. 14 887 2018.
Page generated: Tue Dec 15 12:08:19 2020
ISSN: ESSN 1552-4469 PubMed: 30120360 DOI: 10.1038/S41589-018-0114-4 |
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