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Sodium in PDB 6bzx: Structure of the Artificial Complex Alpha-Rep/Octarellin V.1 Crystallized By Counter Diffusion in A Capillary

Protein crystallography data

The structure of Structure of the Artificial Complex Alpha-Rep/Octarellin V.1 Crystallized By Counter Diffusion in A Capillary, PDB code: 6bzx was solved by F.Aedo, C.Contreras-Martel, J.Martinez-Oyanedel, M.Bunster, P.Minard, C.Van De Weerdt, M.Figueroa, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.94 / 3.11
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 70.562, 41.108, 81.409, 90.00, 106.57, 90.00
R / Rfree (%) 24.5 / 30.4

Sodium Binding Sites:

The binding sites of Sodium atom in the Structure of the Artificial Complex Alpha-Rep/Octarellin V.1 Crystallized By Counter Diffusion in A Capillary (pdb code 6bzx). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Structure of the Artificial Complex Alpha-Rep/Octarellin V.1 Crystallized By Counter Diffusion in A Capillary, PDB code: 6bzx:

Sodium binding site 1 out of 1 in 6bzx

Go back to Sodium Binding Sites List in 6bzx
Sodium binding site 1 out of 1 in the Structure of the Artificial Complex Alpha-Rep/Octarellin V.1 Crystallized By Counter Diffusion in A Capillary


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Structure of the Artificial Complex Alpha-Rep/Octarellin V.1 Crystallized By Counter Diffusion in A Capillary within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Na301

b:81.3
occ:1.00
CZ2 B:TRP178 3.7 0.6 1.0
CH2 B:TRP178 3.8 1.0 1.0
CZ B:PHE3 4.1 0.3 1.0
CG1 B:ILE150 4.3 0.0 1.0
CZ B:PHE85 4.4 95.2 1.0
CE2 B:PHE85 4.5 93.7 1.0
CE2 B:PHE3 4.5 0.5 1.0
CG2 B:ILE153 4.7 88.9 1.0
CE1 B:PHE85 5.0 96.3 1.0
CE2 B:TRP178 5.0 0.9 1.0

Reference:

F.Aedo, M.Figueroa. Crystallization of the Artificial Complex Alpha-Rep/Octarellin V.1 By Counter Diffusion Allowed to Have A Most Complete Structure To Be Published.
Page generated: Tue Dec 15 12:00:20 2020

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