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Atomistry » Sodium » PDB 5v0e-5vb8 » 5v1j | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Atomistry » Sodium » PDB 5v0e-5vb8 » 5v1j » |
Sodium in PDB 5v1j: Dna Polymerase Beta Open Product Complex with 8-Oxog:C and Inserted DctpEnzymatic activity of Dna Polymerase Beta Open Product Complex with 8-Oxog:C and Inserted Dctp
All present enzymatic activity of Dna Polymerase Beta Open Product Complex with 8-Oxog:C and Inserted Dctp:
2.7.7.7; Protein crystallography data
The structure of Dna Polymerase Beta Open Product Complex with 8-Oxog:C and Inserted Dctp, PDB code: 5v1j
was solved by
B.D.Freudenthal,
M.R.Smith,
A.M.Whitaker,
M.A.Schaich,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Sodium Binding Sites:
The binding sites of Sodium atom in the Dna Polymerase Beta Open Product Complex with 8-Oxog:C and Inserted Dctp
(pdb code 5v1j). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the Dna Polymerase Beta Open Product Complex with 8-Oxog:C and Inserted Dctp, PDB code: 5v1j: Jump to Sodium binding site number: 1; 2; Sodium binding site 1 out of 2 in 5v1jGo back to Sodium Binding Sites List in 5v1j
Sodium binding site 1 out
of 2 in the Dna Polymerase Beta Open Product Complex with 8-Oxog:C and Inserted Dctp
Mono view Stereo pair view
Sodium binding site 2 out of 2 in 5v1jGo back to Sodium Binding Sites List in 5v1j
Sodium binding site 2 out
of 2 in the Dna Polymerase Beta Open Product Complex with 8-Oxog:C and Inserted Dctp
Mono view Stereo pair view
Reference:
A.M.Whitaker,
M.R.Smith,
M.A.Schaich,
B.D.Freudenthal.
Capturing A Mammalian Dna Polymerase Extending From An Oxidized Nucleotide. Nucleic Acids Res. V. 45 6934 2017.
Page generated: Tue Oct 8 00:42:36 2024
ISSN: ESSN 1362-4962 PubMed: 28449123 DOI: 10.1093/NAR/GKX293 |
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