Sodium »
PDB 5iaj-5imz »
5iio »
Sodium in PDB 5iio: Crystal Structure of the Dna Polymerase Lambda Binary Complex
Enzymatic activity of Crystal Structure of the Dna Polymerase Lambda Binary Complex
All present enzymatic activity of Crystal Structure of the Dna Polymerase Lambda Binary Complex:
2.7.7.7;
2.7.7.7;
Protein crystallography data
The structure of Crystal Structure of the Dna Polymerase Lambda Binary Complex, PDB code: 5iio
was solved by
M.J.Burak,
K.E.Guja,
M.Garcia-Diaz,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 45.09 / 2.08 |
| Space group | P 21 21 2 |
| Cell size a, b, c (Å), α, β, γ (°) | 191.423, 98.980, 105.034, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 19.1 / 23.5 |
Sodium Binding Sites:
The binding sites of Sodium atom in the Crystal Structure of the Dna Polymerase Lambda Binary Complex
(pdb code 5iio). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total 6 binding sites of Sodium where determined in the Crystal Structure of the Dna Polymerase Lambda Binary Complex, PDB code: 5iio:
Jump to Sodium binding site number: 1; 2; 3; 4; 5; 6;
In total 6 binding sites of Sodium where determined in the Crystal Structure of the Dna Polymerase Lambda Binary Complex, PDB code: 5iio:
Jump to Sodium binding site number: 1; 2; 3; 4; 5; 6;
Sodium binding site 1 out of 6 in 5iio
Go back to
Sodium Binding Sites List in 5iio
Sodium binding site 1 out
of 6 in the Crystal Structure of the Dna Polymerase Lambda Binary Complex
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 1 of Crystal Structure of the Dna Polymerase Lambda Binary Complex within 5.0Å range:
|
Sodium binding site 2 out of 6 in 5iio
Go back to
Sodium Binding Sites List in 5iio
Sodium binding site 2 out
of 6 in the Crystal Structure of the Dna Polymerase Lambda Binary Complex
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 2 of Crystal Structure of the Dna Polymerase Lambda Binary Complex within 5.0Å range:
|
Sodium binding site 3 out of 6 in 5iio
Go back to
Sodium Binding Sites List in 5iio
Sodium binding site 3 out
of 6 in the Crystal Structure of the Dna Polymerase Lambda Binary Complex
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 3 of Crystal Structure of the Dna Polymerase Lambda Binary Complex within 5.0Å range:
|
Sodium binding site 4 out of 6 in 5iio
Go back to
Sodium Binding Sites List in 5iio
Sodium binding site 4 out
of 6 in the Crystal Structure of the Dna Polymerase Lambda Binary Complex
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 4 of Crystal Structure of the Dna Polymerase Lambda Binary Complex within 5.0Å range:
|
Sodium binding site 5 out of 6 in 5iio
Go back to
Sodium Binding Sites List in 5iio
Sodium binding site 5 out
of 6 in the Crystal Structure of the Dna Polymerase Lambda Binary Complex
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 5 of Crystal Structure of the Dna Polymerase Lambda Binary Complex within 5.0Å range:
|
Sodium binding site 6 out of 6 in 5iio
Go back to
Sodium Binding Sites List in 5iio
Sodium binding site 6 out
of 6 in the Crystal Structure of the Dna Polymerase Lambda Binary Complex
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 6 of Crystal Structure of the Dna Polymerase Lambda Binary Complex within 5.0Å range:
|
Reference:
M.J.Burak,
K.E.Guja,
E.Hambardjieva,
B.Derkunt,
M.Garcia-Diaz.
A Fidelity Mechanism in Dna Polymerase Lambda Promotes Error-Free Bypass of 8-Oxo-Dg. Embo J. V. 35 2045 2016.
ISSN: ESSN 1460-2075
PubMed: 27481934
DOI: 10.15252/EMBJ.201694332
Page generated: Tue Dec 15 11:06:03 2020
ISSN: ESSN 1460-2075
PubMed: 27481934
DOI: 10.15252/EMBJ.201694332
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