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Sodium in PDB 5i3k: Structure-Function Studies on Role of Hydrophobic Clamping of A Basic Glutamate in Catalysis By Triosephosphate Isomerase
Enzymatic activity of Structure-Function Studies on Role of Hydrophobic Clamping of A Basic Glutamate in Catalysis By Triosephosphate Isomerase
All present enzymatic activity of Structure-Function Studies on Role of Hydrophobic Clamping of A Basic Glutamate in Catalysis By Triosephosphate Isomerase:
5.3.1.1;
5.3.1.1;
Protein crystallography data
The structure of Structure-Function Studies on Role of Hydrophobic Clamping of A Basic Glutamate in Catalysis By Triosephosphate Isomerase, PDB code: 5i3k
was solved by
E.J.Drake,
A.M.Gulick,
J.P.Richard,
X.Zhai,
K.Kim,
C.J.Reinhardt,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 72.91 / 2.21 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 69.890, 87.600, 76.380, 90.00, 107.35, 90.00 |
| R / Rfree (%) | 21.9 / 26.4 |
Sodium Binding Sites:
The binding sites of Sodium atom in the Structure-Function Studies on Role of Hydrophobic Clamping of A Basic Glutamate in Catalysis By Triosephosphate Isomerase
(pdb code 5i3k). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total 3 binding sites of Sodium where determined in the Structure-Function Studies on Role of Hydrophobic Clamping of A Basic Glutamate in Catalysis By Triosephosphate Isomerase, PDB code: 5i3k:
Jump to Sodium binding site number: 1; 2; 3;
In total 3 binding sites of Sodium where determined in the Structure-Function Studies on Role of Hydrophobic Clamping of A Basic Glutamate in Catalysis By Triosephosphate Isomerase, PDB code: 5i3k:
Jump to Sodium binding site number: 1; 2; 3;
Sodium binding site 1 out of 3 in 5i3k
Go back to
Sodium Binding Sites List in 5i3k
Sodium binding site 1 out
of 3 in the Structure-Function Studies on Role of Hydrophobic Clamping of A Basic Glutamate in Catalysis By Triosephosphate Isomerase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 1 of Structure-Function Studies on Role of Hydrophobic Clamping of A Basic Glutamate in Catalysis By Triosephosphate Isomerase within 5.0Å range:
|
Sodium binding site 2 out of 3 in 5i3k
Go back to
Sodium Binding Sites List in 5i3k
Sodium binding site 2 out
of 3 in the Structure-Function Studies on Role of Hydrophobic Clamping of A Basic Glutamate in Catalysis By Triosephosphate Isomerase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 2 of Structure-Function Studies on Role of Hydrophobic Clamping of A Basic Glutamate in Catalysis By Triosephosphate Isomerase within 5.0Å range:
|
Sodium binding site 3 out of 3 in 5i3k
Go back to
Sodium Binding Sites List in 5i3k
Sodium binding site 3 out
of 3 in the Structure-Function Studies on Role of Hydrophobic Clamping of A Basic Glutamate in Catalysis By Triosephosphate Isomerase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 3 of Structure-Function Studies on Role of Hydrophobic Clamping of A Basic Glutamate in Catalysis By Triosephosphate Isomerase within 5.0Å range:
|
Reference:
J.P.Richard,
T.L.Amyes,
M.M.Malabanan,
X.Zhai,
K.J.Kim,
C.J.Reinhardt,
R.K.Wierenga,
E.J.Drake,
A.M.Gulick.
Structure-Function Studies of Hydrophobic Residues That Clamp A Basic Glutamate Side Chain During Catalysis By Triosephosphate Isomerase. Biochemistry V. 55 3036 2016.
ISSN: ISSN 0006-2960
PubMed: 27149328
DOI: 10.1021/ACS.BIOCHEM.6B00311
Page generated: Tue Dec 15 11:04:08 2020
ISSN: ISSN 0006-2960
PubMed: 27149328
DOI: 10.1021/ACS.BIOCHEM.6B00311
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