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Sodium in PDB 5cxj: Structure of XOO1075, A Peptide Deformylase From Xanthomonas Oryzae Pv Oryzae, in Complex with Fragment 124
Enzymatic activity of Structure of XOO1075, A Peptide Deformylase From Xanthomonas Oryzae Pv Oryzae, in Complex with Fragment 124
All present enzymatic activity of Structure of XOO1075, A Peptide Deformylase From Xanthomonas Oryzae Pv Oryzae, in Complex with Fragment 124:
3.5.1.88;
3.5.1.88;
Protein crystallography data
The structure of Structure of XOO1075, A Peptide Deformylase From Xanthomonas Oryzae Pv Oryzae, in Complex with Fragment 124, PDB code: 5cxj
was solved by
H.P.T.Ngo,
L.W.Kang,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 30.40 / 2.38 |
| Space group | P 61 2 2 |
| Cell size a, b, c (Å), α, β, γ (°) | 58.702, 58.702, 265.366, 90.00, 90.00, 120.00 |
| R / Rfree (%) | 18.1 / 22.6 |
Other elements in 5cxj:
The structure of Structure of XOO1075, A Peptide Deformylase From Xanthomonas Oryzae Pv Oryzae, in Complex with Fragment 124 also contains other interesting chemical elements:
| Cadmium | (Cd) | 4 atoms |
Sodium Binding Sites:
The binding sites of Sodium atom in the Structure of XOO1075, A Peptide Deformylase From Xanthomonas Oryzae Pv Oryzae, in Complex with Fragment 124
(pdb code 5cxj). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Structure of XOO1075, A Peptide Deformylase From Xanthomonas Oryzae Pv Oryzae, in Complex with Fragment 124, PDB code: 5cxj:
In total only one binding site of Sodium was determined in the Structure of XOO1075, A Peptide Deformylase From Xanthomonas Oryzae Pv Oryzae, in Complex with Fragment 124, PDB code: 5cxj:
Sodium binding site 1 out of 1 in 5cxj
Go back to
Sodium Binding Sites List in 5cxj
Sodium binding site 1 out
of 1 in the Structure of XOO1075, A Peptide Deformylase From Xanthomonas Oryzae Pv Oryzae, in Complex with Fragment 124
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 1 of Structure of XOO1075, A Peptide Deformylase From Xanthomonas Oryzae Pv Oryzae, in Complex with Fragment 124 within 5.0Å range:
|
Reference:
H.P.T.Ngo,
L.W.Kang.
Structure of XOO1075, A Peptide Deformylase From Xanthomonas Oryzae Pv Oryzae, in Complex with Fragment 124 To Be Published.
Page generated: Mon Oct 7 20:28:03 2024
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