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Sodium in PDB 5cwy: Structure of XOO1075, A Peptide Deformylase From Xanthomonas Oryze Pv Oryzae, in Complex with Fragment 83
Enzymatic activity of Structure of XOO1075, A Peptide Deformylase From Xanthomonas Oryze Pv Oryzae, in Complex with Fragment 83
All present enzymatic activity of Structure of XOO1075, A Peptide Deformylase From Xanthomonas Oryze Pv Oryzae, in Complex with Fragment 83:
3.5.1.88;
3.5.1.88;
Protein crystallography data
The structure of Structure of XOO1075, A Peptide Deformylase From Xanthomonas Oryze Pv Oryzae, in Complex with Fragment 83, PDB code: 5cwy
was solved by
H.P.T.Ngo,
L.W.Kang,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 30.40 / 2.40 |
| Space group | P 61 2 2 |
| Cell size a, b, c (Å), α, β, γ (°) | 58.974, 58.974, 263.790, 90.00, 90.00, 120.00 |
| R / Rfree (%) | 18.5 / 22.8 |
Other elements in 5cwy:
The structure of Structure of XOO1075, A Peptide Deformylase From Xanthomonas Oryze Pv Oryzae, in Complex with Fragment 83 also contains other interesting chemical elements:
| Cadmium | (Cd) | 3 atoms |
Sodium Binding Sites:
The binding sites of Sodium atom in the Structure of XOO1075, A Peptide Deformylase From Xanthomonas Oryze Pv Oryzae, in Complex with Fragment 83
(pdb code 5cwy). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Structure of XOO1075, A Peptide Deformylase From Xanthomonas Oryze Pv Oryzae, in Complex with Fragment 83, PDB code: 5cwy:
In total only one binding site of Sodium was determined in the Structure of XOO1075, A Peptide Deformylase From Xanthomonas Oryze Pv Oryzae, in Complex with Fragment 83, PDB code: 5cwy:
Sodium binding site 1 out of 1 in 5cwy
Go back to
Sodium Binding Sites List in 5cwy
Sodium binding site 1 out
of 1 in the Structure of XOO1075, A Peptide Deformylase From Xanthomonas Oryze Pv Oryzae, in Complex with Fragment 83
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 1 of Structure of XOO1075, A Peptide Deformylase From Xanthomonas Oryze Pv Oryzae, in Complex with Fragment 83 within 5.0Å range:
|
Reference:
H.P.T.Ngo,
L.W.Kang.
Structure of XOO1075, A Peptide Deformylase From Xanthomonas Oryze Pv Oryzae, in Complex with Fragment 83 To Be Published.
Page generated: Tue Dec 15 10:46:55 2020
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