Sodium in PDB 5axa: Crystal Structure of Mouse Sahh Complexed with Adenosine

All present enzymatic activity of Crystal Structure of Mouse Sahh Complexed with Adenosine:
3.3.1.1;

The structure of Crystal Structure of Mouse Sahh Complexed with Adenosine, PDB code: 5axa was solved by Y.Kusakabe, M.Ishihara, N.Tanaka, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 1.55
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	100.644, 104.443, 177.309, 90.00, 90.00, 90.00
R / Rfree (%)	18.8 / 22.9

The binding sites of Sodium atom in the Crystal Structure of Mouse Sahh Complexed with Adenosine (pdb code 5axa). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the Crystal Structure of Mouse Sahh Complexed with Adenosine, PDB code: 5axa:
Jump to Sodium binding site number: 1; 2;

Sodium binding site 1 out of 2 in the Crystal Structure of Mouse Sahh Complexed with Adenosine


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Mouse Sahh Complexed with Adenosine within 5.0Å range: probe atom residue distance (Å) B Occ A:Na503 b:23.1 occ:1.00 OE2 A:GLU59 2.2 19.5 1.0 O A:HOH801 2.3 20.1 1.0 O A:HOH774 2.3 15.6 1.0 O C:HOH655 2.4 15.1 1.0 O A:HOH1059 2.4 24.5 1.0 CD A:GLU59 3.1 15.5 1.0 OE1 A:GLU59 3.4 13.9 1.0 CB C:ASP208 3.7 14.5 1.0 CG C:ASP208 4.3 15.8 1.0 O A:HOH745 4.3 14.3 1.0 O C:HOH613 4.3 27.1 1.0 N A:SER355 4.4 12.3 1.0 O A:HIS353 4.4 12.2 1.0 O C:ASP208 4.4 13.6 1.0 CG A:GLU59 4.4 14.7 1.0 CB A:VAL58 4.5 12.4 1.0 O C:HOH976 4.5 25.9 1.0 OD2 C:ASP208 4.5 19.2 1.0 O A:MET351 4.6 13.3 1.0 O A:HOH738 4.7 16.8 1.0 CA A:PRO354 4.7 13.7 1.0 CG1 A:VAL58 4.8 13.2 1.0 CB A:SER355 4.8 14.8 1.0 CB A:MET351 4.9 15.2 1.0 C A:PRO354 4.9 12.3 1.0 OD1 C:ASP208 4.9 18.7 1.0 CA C:ASP208 5.0 14.6 1.0 CA A:SER355 5.0 13.3 1.0

Sodium binding site 2 out of 2 in the Crystal Structure of Mouse Sahh Complexed with Adenosine


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of Crystal Structure of Mouse Sahh Complexed with Adenosine within 5.0Å range: probe atom residue distance (Å) B Occ C:Na503 b:20.3 occ:1.00 OE2 C:GLU59 2.2 20.0 1.0 O C:HOH816 2.3 21.1 1.0 O C:HOH819 2.3 17.0 1.0 O A:HOH676 2.3 15.5 1.0 O C:HOH1071 2.4 25.4 1.0 CD C:GLU59 3.2 16.8 1.0 OE1 C:GLU59 3.5 16.4 1.0 CB A:ASP208 3.7 14.3 1.0 CG A:ASP208 4.3 16.8 1.0 N C:SER355 4.3 13.4 1.0 O C:HOH679 4.3 18.0 1.0 O A:ASP208 4.4 13.9 1.0 O C:HIS353 4.4 13.3 1.0 O A:HOH616 4.5 25.6 1.0 CG C:GLU59 4.5 13.8 1.0 O C:MET351 4.5 13.8 1.0 OD2 A:ASP208 4.5 19.3 1.0 CB C:VAL58 4.5 11.9 1.0 O A:HOH973 4.5 22.6 1.0 CA C:PRO354 4.6 13.9 1.0 O C:HOH791 4.7 17.8 1.0 CB C:MET351 4.8 15.0 1.0 CG1 C:VAL58 4.8 14.4 1.0 CB C:SER355 4.9 14.0 1.0 C C:PRO354 4.9 13.9 1.0 OD1 A:ASP208 4.9 19.1 1.0 CA A:ASP208 5.0 14.2 1.0 OE1 C:GLN85 5.0 13.5 1.0

Y.Kusakabe, M.Ishihara, N.Tanaka. Crystal Structure of Mouse Sahh Complexed with Adenosine To Be Published.