Sodium in PDB 4txo: Crystal Structure of the Mixed Disulfide Complex of Thioredoxin-Like Tlpas(C110S) and Copper Chaperone Scois(C74S)

The structure of Crystal Structure of the Mixed Disulfide Complex of Thioredoxin-Like Tlpas(C110S) and Copper Chaperone Scois(C74S), PDB code: 4txo was solved by M.A.Scharer, H.K.Abicht, R.Glockshuber, H.Hennecke, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	49.34 / 2.20
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	60.030, 173.220, 66.690, 90.00, 89.97, 90.00
R / Rfree (%)	17.4 / 20.7

The binding sites of Sodium atom in the Crystal Structure of the Mixed Disulfide Complex of Thioredoxin-Like Tlpas(C110S) and Copper Chaperone Scois(C74S) (pdb code 4txo). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the Crystal Structure of the Mixed Disulfide Complex of Thioredoxin-Like Tlpas(C110S) and Copper Chaperone Scois(C74S), PDB code: 4txo:
Jump to Sodium binding site number: 1; 2;

Sodium binding site 1 out of 2 in the Crystal Structure of the Mixed Disulfide Complex of Thioredoxin-Like Tlpas(C110S) and Copper Chaperone Scois(C74S)


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of the Mixed Disulfide Complex of Thioredoxin-Like Tlpas(C110S) and Copper Chaperone Scois(C74S) within 5.0Å range: probe atom residue distance (Å) B Occ A:Na302 b:30.2 occ:1.00 NH2 A:ARG139 3.4 39.6 1.0 CG G:PRO72 3.8 50.6 1.0 CG1 G:VAL49 3.8 38.7 1.0 CD G:PRO72 3.8 51.5 1.0 CB G:VAL49 3.9 38.8 1.0 CG2 G:VAL49 3.9 37.1 1.0 NH1 A:ARG139 4.2 43.2 1.0 CZ A:ARG139 4.3 40.8 1.0 CG G:ARG46 4.4 51.4 1.0 CG B:PRO125 4.4 26.2 1.0 N G:PRO72 4.6 50.8 1.0 CA G:ARG46 4.6 47.5 1.0 CB G:ARG46 4.7 50.7 1.0 O G:SER70 4.7 72.1 1.0 O G:ARG46 4.9 45.4 1.0 CA G:ALA71 4.9 59.4 1.0

Sodium binding site 2 out of 2 in the Crystal Structure of the Mixed Disulfide Complex of Thioredoxin-Like Tlpas(C110S) and Copper Chaperone Scois(C74S)


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of Crystal Structure of the Mixed Disulfide Complex of Thioredoxin-Like Tlpas(C110S) and Copper Chaperone Scois(C74S) within 5.0Å range: probe atom residue distance (Å) B Occ B:Na201 b:45.9 occ:1.00 O B:PRO75 2.7 54.8 1.0 O B:SER74 2.9 61.2 1.0 C B:PRO75 3.0 53.0 1.0 CA B:PRO75 3.3 53.4 1.0 OD2 B:ASP157 3.3 57.0 1.0 CG2 B:THR153 3.5 63.1 1.0 OD1 B:ASP76 3.6 47.0 1.0 C B:SER74 3.8 60.5 1.0 N B:ASP76 3.8 49.4 1.0 N B:PRO75 4.0 54.8 1.0 CG B:ASP157 4.2 59.8 1.0 OD1 B:ASP157 4.3 63.6 1.0 CA B:ASP76 4.5 46.9 1.0 CG B:ASP76 4.6 46.4 1.0 CB B:PRO75 4.6 52.1 1.0 NE2 B:HIS73 4.7 56.9 1.0 CB B:THR153 4.7 62.4 1.0 O B:LYS154 4.8 80.3 1.0

H.K.Abicht, M.A.Schaerer, N.Quade, R.Ledermann, E.Mohorko, G.Capitani, H.Hennecke, R.Glockshuber. How Periplasmic Thioredoxin Tlpa Reduces Bacterial Copper Chaperone Scoi and Cytochrome Oxidase Subunit II (Coxb) Prior to Metallation. J.Biol.Chem. 2014.
ISSN: ESSN 1083-351X
PubMed: 25274631
DOI: 10.1074/JBC.M114.607127