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Sodium in PDB 4dip: Crystal Structure of Human Peptidyl-Prolyl Cis-Trans Isomerase FKBP14

Enzymatic activity of Crystal Structure of Human Peptidyl-Prolyl Cis-Trans Isomerase FKBP14

All present enzymatic activity of Crystal Structure of Human Peptidyl-Prolyl Cis-Trans Isomerase FKBP14:
5.2.1.8;

Protein crystallography data

The structure of Crystal Structure of Human Peptidyl-Prolyl Cis-Trans Isomerase FKBP14, PDB code: 4dip was solved by T.Krojer, W.Kiyani, S.Goubin, J.R.C.Muniz, P.Filippakopoulos, C.H.Arrowsmith, A.Edwards, C.Bountra, F.Von Delft, U.Oppermann, J.Zschocke, W.W.Yue, Structural Genomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 58.95 / 1.82
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 63.120, 64.060, 80.810, 81.23, 75.21, 73.38
R / Rfree (%) 20.3 / 23.1

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of Human Peptidyl-Prolyl Cis-Trans Isomerase FKBP14 (pdb code 4dip). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Human Peptidyl-Prolyl Cis-Trans Isomerase FKBP14, PDB code: 4dip:

Sodium binding site 1 out of 1 in 4dip

Go back to Sodium Binding Sites List in 4dip
Sodium binding site 1 out of 1 in the Crystal Structure of Human Peptidyl-Prolyl Cis-Trans Isomerase FKBP14


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Human Peptidyl-Prolyl Cis-Trans Isomerase FKBP14 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Na201

b:34.6
occ:1.00
N B:ASN136 3.4 20.2 1.0
CG B:ASN136 3.8 24.9 1.0
OD1 B:ASN136 4.0 21.4 1.0
CA B:ARG135 4.0 17.4 1.0
NH1 B:ARG40 4.0 19.2 1.0
CB B:ASN136 4.1 24.4 1.0
ND2 B:ASN136 4.2 26.3 1.0
C B:ARG135 4.2 17.6 1.0
NH2 B:ARG135 4.2 35.0 1.0
CB B:ARG135 4.3 20.7 1.0
CZ B:ARG135 4.4 34.1 1.0
CA B:ASN136 4.4 22.3 1.0
CG B:ARG135 4.6 23.8 1.0
NE B:ARG135 4.7 27.9 1.0
NH1 B:ARG135 4.8 35.5 1.0
O B:ILE134 4.9 13.4 1.0
O B:HOH377 4.9 32.8 1.0

Reference:

T.Krojer, W.Kiyani, S.Goubin, J.R.C.Muniz, P.Filippakopoulos, C.H.Arrowsmith, A.Edwards, C.Bountra, F.Von Delft, U.Oppermann, J.Zschocke, W.W.Yue, Structural Genomics Consortium (Sgc). Crystal Structure of Human Peptidyl-Prolyl Cis-Trans Isomerase FKBP14 To Be Published.
Page generated: Mon Oct 7 14:57:00 2024

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