Sodium in PDB 4dap: The Structure of Escherichia Coli Sfsa

The structure of The Structure of Escherichia Coli Sfsa, PDB code: 4dap was solved by P.J.Baker, F.L.Allen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	83.33 / 2.20
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	117.728, 117.728, 77.594, 90.00, 90.00, 90.00
R / Rfree (%)	20.5 / 23.1

The binding sites of Sodium atom in the The Structure of Escherichia Coli Sfsa (pdb code 4dap). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the The Structure of Escherichia Coli Sfsa, PDB code: 4dap:

Sodium binding site 1 out of 1 in the The Structure of Escherichia Coli Sfsa


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of The Structure of Escherichia Coli Sfsa within 5.0Å range: probe atom residue distance (Å) B Occ A:Na301 b:48.6 occ:1.00 O A:HOH402 2.4 45.6 1.0 O A:HOH404 2.5 57.2 1.0 O A:VAL136 2.5 34.0 1.0 O A:HOH401 2.6 60.5 1.0 OD2 A:ASP121 2.7 34.5 1.0 O A:HOH403 2.7 38.2 1.0 CG A:ASP121 3.5 36.4 1.0 OD1 A:ASP121 3.6 35.1 1.0 C A:VAL136 3.6 33.3 1.0 N A:VAL136 4.0 32.7 1.0 CE A:LYS137 4.1 41.9 1.0 CA A:VAL136 4.3 32.7 1.0 CB A:VAL136 4.5 32.6 1.0 CG A:GLU135 4.5 38.3 1.0 O A:HOH483 4.5 46.1 1.0 O A:HOH448 4.5 45.5 1.0 N A:LYS137 4.7 33.7 1.0 NZ A:LYS137 4.7 45.0 1.0 OD1 A:ASN86 4.8 35.0 1.0 CB A:ASP121 4.9 36.2 1.0 O A:HOH408 5.0 28.4 1.0 CA A:LYS137 5.0 34.2 1.0

F.L.Allen, J.Akerboom, S.J.Bliss, F.Blombach, S.E.Sedelnikova, J.Van Der Oost, P.J.Baker. The Structure of Sfsa and Its Dna Complex; A Dna/Rna Nuclease with A Novel Domain Combination To Be Published.