Sodium in PDB 3thx: Human Mutsbeta Complexed with An Idl of 3 Bases (LOOP3) and Adp

The structure of Human Mutsbeta Complexed with An Idl of 3 Bases (LOOP3) and Adp, PDB code: 3thx was solved by W.Yang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	27.00 / 2.70
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	67.120, 91.540, 95.580, 67.88, 86.51, 72.86
R / Rfree (%)	21 / 27.3

The binding sites of Sodium atom in the Human Mutsbeta Complexed with An Idl of 3 Bases (LOOP3) and Adp (pdb code 3thx). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Human Mutsbeta Complexed with An Idl of 3 Bases (LOOP3) and Adp, PDB code: 3thx:

Sodium binding site 1 out of 1 in the Human Mutsbeta Complexed with An Idl of 3 Bases (LOOP3) and Adp


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Human Mutsbeta Complexed with An Idl of 3 Bases (LOOP3) and Adp within 5.0Å range: probe atom residue distance (Å) B Occ B:Na1 b:95.8 occ:1.00 O B:ILE922 3.5 64.0 1.0 OE2 B:GLU844 3.5 85.8 1.0 OE1 B:GLN960 3.6 75.8 1.0 O B:GLU844 3.7 77.0 1.0 CG B:GLN960 4.0 78.6 1.0 CD B:GLN960 4.2 78.3 1.0 CG2 B:ILE922 4.2 62.4 1.0 CB B:GLN960 4.3 73.1 1.0 C B:ILE922 4.4 61.2 1.0 CD B:GLU844 4.4 84.7 1.0 CB B:ILE922 4.5 63.0 1.0 N B:ASP924 4.8 47.6 1.0 C B:GLU844 4.9 78.0 1.0 CB B:ASP924 4.9 60.5 1.0

S.Gupta, M.Gellert, W.Yang. Mechanism of Mismatch Recognition Revealed By Human Mutsbeta Bound to Unpaired Dna Loops Nat.Struct.Mol.Biol. V. 19 72 2012.
ISSN: ISSN 1545-9993
PubMed: 22179786
DOI: 10.1038/NSMB.2175