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Sodium in PDB 3tau: Crystal Structure of A Putative Guanylate Monophosphaste Kinase From Listeria Monocytogenes Egd-E

Enzymatic activity of Crystal Structure of A Putative Guanylate Monophosphaste Kinase From Listeria Monocytogenes Egd-E

All present enzymatic activity of Crystal Structure of A Putative Guanylate Monophosphaste Kinase From Listeria Monocytogenes Egd-E:
2.7.4.8;

Protein crystallography data

The structure of Crystal Structure of A Putative Guanylate Monophosphaste Kinase From Listeria Monocytogenes Egd-E, PDB code: 3tau was solved by J.S.Brunzelle, Z.Wawrzak, O.Onopriyenko, J.Kwok, W.F.Anderson, A.Savchenko, Center For Structural Genomics Of Infectious Diseases(Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.38 / 2.05
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 58.733, 65.321, 107.320, 90.00, 90.00, 90.00
R / Rfree (%) 18.4 / 22

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of A Putative Guanylate Monophosphaste Kinase From Listeria Monocytogenes Egd-E (pdb code 3tau). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of A Putative Guanylate Monophosphaste Kinase From Listeria Monocytogenes Egd-E, PDB code: 3tau:

Sodium binding site 1 out of 1 in 3tau

Go back to Sodium Binding Sites List in 3tau
Sodium binding site 1 out of 1 in the Crystal Structure of A Putative Guanylate Monophosphaste Kinase From Listeria Monocytogenes Egd-E


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of A Putative Guanylate Monophosphaste Kinase From Listeria Monocytogenes Egd-E within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na208

b:31.2
occ:1.00
 OE1 A:GLN177 2.2 48.1 1.0
O A:HOH324 3.1 69.3 1.0
NZ A:LYS180 3.1 26.0 1.0
CD A:GLN177 3.3 52.5 1.0
O A:HOH309 3.5 39.3 1.0
NE2 A:GLN177 3.7 39.4 1.0
CE A:LYS180 3.9 28.0 1.0
O A:HOH356 4.1 35.8 1.0
OE1 A:GLU30 4.4 31.9 1.0
OD2 A:ASP28 4.5 29.9 1.0
CG A:GLN177 4.6 27.1 1.0
OE2 A:GLU30 4.7 25.1 1.0
CB A:GLN177 4.8 16.1 1.0
CD A:GLU30 4.9 42.9 1.0

Reference:

J.S.Brunzelle, Z.Wawrzak, O.Onopriyenko, J.Kwok, W.F.Anderson, A.Savchenko. Crystal Structure of A Putative Guanylate Monophosphaste Kinase From Listeria Monocytogenes Egd-E To Be Published.
Page generated: Tue Dec 15 06:25:58 2020

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