Sodium in the structure of The Structure of Rat Cytosolic Pepck in Complex With Sulfoacetate. (pdb 2rke)

The binding sites of Sodium atom in the structure of The Structure of Rat Cytosolic Pepck in Complex With Sulfoacetate. (pdb code 2rke). This binding sites where shown with 5.0 Angstroms radius around Sodium atom. The 2rke structure was solved by S.M.SULLIVAN, R.M.STIFFIN, G.M.CARLSON, T.HOLYOAK, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 29.1-1.8 Space group P1211 a (A) 45.180 b (A) 119.031 c (A) 60.885 alpha (°) 90.00 beta (°) 108.84 gamma (°) 90.00 Rfactor (%) 20.3 Rfree (%) 24.9 Sodium Binding Sites: Sodium binding site 1 out of 1 in 2rke Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Sodium in the PDB 2rke. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Gly64, A: Val65, A: Ala78, A: Leu79, A: Thr80, A: Asn208, A: Asn209, A: Trp210, A: Hoh751, A: Hoh1037, A: Hoh1065, conact list: Atom Atom Distance (A) Na O A:Gly64 4.27 Na O A:Val65 3.73 Na C A:Val65 4.49 Na CA A:Val65 4.72 Na C A:Ala78 4.93 Na O A:Leu79 2.37 Na N A:Leu79 3.82 Na CB A:Leu79 4.31 Na C A:Leu79 3.47 Na CA A:Leu79 4.05 Na N A:Thr80 4.58 Na CA A:Thr80 4.90 Na O A:Asn208 2.31 Na CB A:Asn208 4.18 Na C A:Asn208 3.48 Na CA A:Asn208 4.38 Na O A:Asn209 4.23 Na N A:Asn209 4.37 Na CB A:Asn209 4.34 Na C A:Asn209 4.21 Na CA A:Asn209 4.48 Na N A:Trp210 4.63 Na CB A:Trp210 4.66 Na O A:Hoh751 2.25 Na O A:Hoh1037 2.34 Na O A:Hoh1065 2.70 interactive model: