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Sodium in PDB 2ov0: Structure of the Blue Copper Protein Amicyanin to 0.75 A Resolution

Protein crystallography data

The structure of Structure of the Blue Copper Protein Amicyanin to 0.75 A Resolution, PDB code: 2ov0 was solved by C.J.Carrell, V.L.Davidson, Z.Chen, L.M.Cunane, P.Trickey, F.S.Mathews, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 0.75
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 28.540, 55.890, 27.160, 90.00, 95.61, 90.00
R / Rfree (%) 12.5 / 14.2

Other elements in 2ov0:

The structure of Structure of the Blue Copper Protein Amicyanin to 0.75 A Resolution also contains other interesting chemical elements:

Copper (Cu) 1 atom

Sodium Binding Sites:

The binding sites of Sodium atom in the Structure of the Blue Copper Protein Amicyanin to 0.75 A Resolution (pdb code 2ov0). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Structure of the Blue Copper Protein Amicyanin to 0.75 A Resolution, PDB code: 2ov0:

Sodium binding site 1 out of 1 in 2ov0

Go back to Sodium Binding Sites List in 2ov0
Sodium binding site 1 out of 1 in the Structure of the Blue Copper Protein Amicyanin to 0.75 A Resolution


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Structure of the Blue Copper Protein Amicyanin to 0.75 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na312

b:13.3
occ:1.00
O A:HOH411 2.5 18.4 1.0
OE1 A:GLU49 2.7 18.6 1.0
CG A:MET28 3.4 7.3 1.0
CA A:LYS27 3.6 7.4 1.0
CD A:GLU49 3.7 10.3 1.0
N A:MET28 3.8 6.2 1.0
C A:LYS27 3.9 6.9 1.0
OE2 A:GLU49 3.9 11.7 1.0
SD A:MET28 4.0 8.4 1.0
N A:LYS27 4.1 6.6 1.0
O A:HOH418 4.3 15.5 1.0
O A:HOH434 4.4 11.2 1.0
CB A:MET28 4.5 6.8 1.0
O A:LYS27 4.6 7.4 1.0
CA A:MET28 4.7 6.1 1.0
CB A:LYS27 4.8 8.6 1.0
CG A:GLU49 5.0 8.5 1.0

Reference:

C.J.Carrell, V.L.Davidson, Z.Chen, L.M.Cunane, P.Trickey, F.S.Mathews. Ultrahigh Resolution Studies of Amicyanin To Be Published.
Page generated: Tue Dec 15 05:52:59 2020

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