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Sodium in PDB 1t76: Crystal Structure of the Androgen Receptor Ligand Binding Domain in Complex with A Wxxvw Motif

Protein crystallography data

The structure of Crystal Structure of the Androgen Receptor Ligand Binding Domain in Complex with A Wxxvw Motif, PDB code: 1t76 was solved by E.Hur, S.J.Pfaff, E.S.Payne, H.Gron, B.M.Buehrer, R.J.Fletterick, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.10
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 53.386, 66.420, 70.606, 90.00, 90.00, 90.00
R / Rfree (%) 20.8 / 23.9

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of the Androgen Receptor Ligand Binding Domain in Complex with A Wxxvw Motif (pdb code 1t76). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of the Androgen Receptor Ligand Binding Domain in Complex with A Wxxvw Motif, PDB code: 1t76:

Sodium binding site 1 out of 1 in 1t76

Go back to Sodium Binding Sites List in 1t76
Sodium binding site 1 out of 1 in the Crystal Structure of the Androgen Receptor Ligand Binding Domain in Complex with A Wxxvw Motif


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of the Androgen Receptor Ligand Binding Domain in Complex with A Wxxvw Motif within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na202

b:74.0
occ:1.00
OE2 A:GLU897 2.2 58.9 1.0
O A:HOH51 3.1 51.3 1.0
CD A:GLU897 3.2 55.3 1.0
OE1 A:GLN738 3.7 43.2 1.0
CG A:GLU897 3.8 50.8 1.0
OE1 A:GLN902 3.8 51.5 1.0
OE1 A:GLU897 4.2 55.8 1.0
CD A:GLN738 4.3 40.3 1.0
NE2 A:GLN738 4.4 37.2 1.0
CG1 A:VAL901 4.7 37.4 1.0
CD A:GLN902 4.8 46.1 1.0
CB A:VAL901 4.8 37.4 1.0
CD1 B:TRP101 4.9 56.0 1.0
CG A:GLN902 5.0 42.6 1.0

Reference:

E.Hur, S.J.Pfaff, E.S.Payne, H.Gron, B.M.Buehrer, R.J.Fletterick. Recognition and Accommodation at the Androgen Receptor Coactivator Binding Interface. Plos Biol. V. 2 E274 2004.
ISSN: ISSN 1544-9173
PubMed: 15328534
DOI: 10.1371/JOURNAL.PBIO.0020274
Page generated: Tue Dec 15 05:36:21 2020

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