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Sodium in PDB 1ip2: G48A Human Lysozyme

Enzymatic activity of G48A Human Lysozyme

All present enzymatic activity of G48A Human Lysozyme:
3.2.1.17;

Protein crystallography data

The structure of G48A Human Lysozyme, PDB code: 1ip2 was solved by K.Takano, Y.Yamagata, K.Yutani, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.00 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 56.327, 60.958, 32.905, 90.00, 90.00, 90.00
R / Rfree (%) 17.9 / n/a

Sodium Binding Sites:

The binding sites of Sodium atom in the G48A Human Lysozyme (pdb code 1ip2). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the G48A Human Lysozyme, PDB code: 1ip2:

Sodium binding site 1 out of 1 in 1ip2

Go back to Sodium Binding Sites List in 1ip2
Sodium binding site 1 out of 1 in the G48A Human Lysozyme


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of G48A Human Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na601

b:13.6
occ:1.00
O A:HOH154 2.3 15.5 1.0
O A:HOH160 2.3 7.2 1.0
O A:HOH151 4.5 11.1 1.0
O A:HOH192 4.9 21.9 1.0

Reference:

K.Takano, Y.Yamagata, K.Yutani. Role of Amino Acid Residues in Left-Handed Helical Conformation For the Conformational Stability of A Protein. Proteins V. 45 274 2001.
ISSN: ISSN 0887-3585
PubMed: 11599030
DOI: 10.1002/PROT.1147
Page generated: Tue Dec 15 05:25:50 2020

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