Sodium in PDB, part 240 (files: 9561-9600),
PDB 7d93-7e4c
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 9561-9600 (PDB 7d93-7e4c).
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7d93 (Na: 2) - Crystal Structure of the Na+,K+-Atpase in the E2P State with Bound MG2+ and Anthroylouabain (P2(1)2(1)2(1) Symmetry)
Other atoms:
Mg (4);
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7d94 (Na: 2) - Crystal Structure of the Na+,K+-Atpase in the E2P State with Bound One MG2+ and One Rb+ in the Presence of Bufalin
Other atoms:
Mg (4);
Rb (2);
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7dci (Na: 1) - Crystal Structure of HSF2 Dna-Binding Domain in Complex with 2-Site Hse Dna in the Head-to-Head Orientation
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7dcj (Na: 2) - Crystal Structure of HSF1 Dna-Binding Domain in Complex with 2-Site Hse Dna in the Head-to-Head Orientation
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7dcs (Na: 5) - Crystal Structure of HSF1 Dna-Binding Domain in Complex with 3-Site Hse Dna (23 Bp)
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7dct (Na: 2) - Crystal Structure of HSF1 Dna-Binding Domain in Complex with 3-Site Hse Dna (24 Bp)
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7dcu (Na: 3) - Crystal Structure of HSF2 Dna-Binding Domain in Complex with 3-Site Hse Dna (21 Bp)
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7ddf (Na: 2) - Crystal Structures of Na+,K+-Atpase in Complex with Beryllium Fluoride
Other atoms:
F (6);
Mg (4);
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7ddh (Na: 2) - Crystal Structures of Na+,K+-Atpase in Complex with Digoxin
Other atoms:
Mg (4);
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7ddi (Na: 2) - Crystal Structures of Na+,K+-Atpase in Complex with Digitoxin
Other atoms:
Mg (4);
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7ddk (Na: 2) - Crystal Structures of Na+,K+-Atpase in Complex with Rostafuroxin
Other atoms:
Mg (4);
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7ddl (Na: 2) - Crystal Structures of Na+,K+-Atpase in Complex with Bufalin
Other atoms:
Mg (4);
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7deq (Na: 1) - Lysozyme-Sugar Complex in D2O
Other atoms:
Cl (4);
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7der (Na: 1) - Lysozyme Alone in H2O
Other atoms:
Cl (4);
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7dfn (Na: 1) - Crystal Structure of Glycoside Hydrolase Family 11 Beta-Xylanase From Streptomyces Olivaceoviridis E-86 in Complex with Alpha-L- Arabinofuranosyl Xylotetraose
Other atoms:
Cl (59);
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7dfo (Na: 13) - Crystal Structure of Glycoside Hydrolase Family 11 Beta-Xylanase From Streptomyces Olivaceoviridis E-86 in Complex with 4-O-Methyl-Alpha-D- Glucuronopyranosyl Xylotetraose
Other atoms:
Cl (43);
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7dgc (Na: 1) - The Structure of the Arabidopsis Thaliana Guanosine Deaminase in Reaction with 2'-O-Methylguanosine
Other atoms:
Zn (2);
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7dii (Na: 4) - Crystal Structure of Leut in Lipidic Cubic Phase at pH 7
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7dix (Na: 3) - Crystal Structure of Leut in Lipidic Cubic Phase at pH 5
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7dj1 (Na: 4) - Crystal Structure of the G26C Mutant of Leut
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7dj2 (Na: 2) - Crystal Structure of the G26C/E290S Mutant of Leut
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7djc (Na: 2) - Crystal Structure of the G26C/Q250A Mutant of Leut
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7djj (Na: 1) - Structure of Four Truncated and Mutated Forms of Quenching Protein Lumenal Domains
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7djk (Na: 5) - Structure of Four Truncated and Mutated Forms of Quenching Protein
Other atoms:
Cl (2);
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7djl (Na: 1) - Structure of Four Truncated and Mutated Forms of Quenching Protein
Other atoms:
Cl (2);
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7djm (Na: 1) - Structure of Four Truncated and Mutated Forms of Quenching Protein
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7djq (Na: 3) - Crystal Structure of O-Acetyl L-Serine Sulfhydrylase From Haemophilus Influenzae in Complex with C-Terminal Peptide of Ribosomal S4 Domain Protein From Lactobacillus Salivarius.
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7dkm (Na: 1) - Phgdh Covalently Linked to Oridonin
Other atoms:
Cl (2);
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7dlh (Na: 1) - Crystallization of Cationic Peroxidase From Proso Millet and Identification of Its Phosphatase Active Sites
Other atoms:
Ca (1);
Cl (3);
Fe (1);
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7dln (Na: 1) - Structure of Lysozyme Obtained on Ssrf Using Serial Synchrotron Crystallography
Other atoms:
Cl (1);
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7dnb (Na: 1) - Crystal Structure of Phocl Barrel
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7dpd (Na: 1) - Human MCM9 N-Terminal Domain
Other atoms:
Zn (2);
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7dph (Na: 1) - H-Ras Q61H in Complex with Gppnhp (State 1) After Structural Transition By Humidity Control
Other atoms:
Mg (2);
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7dtb (Na: 1) - Room Tempeature Structure of Lysozyme By Fixed-Target Serial Crystallography
Other atoms:
Cl (2);
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7dtf (Na: 1) - Room Temperature Structure of Lysozyme By Serial Millisecond Crystallography
Other atoms:
Cl (2);
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7e02 (Na: 1) - Room Temperature Structure of Lysozyme Delivered in Beef Tallow By Serial Millisecond Crystallography
Other atoms:
Cl (2);
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7e1z (Na: 4) - Cryo Em Structure of A Na+-Bound Na+,K+-Atpase in the E1 State
Other atoms:
Mg (1);
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7e21 (Na: 4) - Cryo Em Structure of A Na+-Bound Na+,K+-Atpase in the E1 State with Atp-Gamma-S
Other atoms:
Mg (1);
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7e4a (Na: 1) - Crystal Structure of Mif Bound to Compound 13
Other atoms:
Cl (11);
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7e4c (Na: 1) - Crystal Structure of Mif Bound to COMPOUND11
Other atoms:
Cl (13);
Page generated: Mon Dec 15 11:16:18 2025
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