Sodium in PDB, part 239 (files: 9521-9560),
PDB 7ci0-7d79
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 9521-9560 (PDB 7ci0-7d79).
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7ci0 (Na: 1) - Microbial Hormone-Sensitive Lipase E53 Mutant S162A
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7cip (Na: 1) - Microbial Hormone-Sensitive Lipase E53 Wild Type
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7cjs (Na: 8) - Structure of Aquaporin
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7cjz (Na: 2) - Room Temperature Structure of Lysozyme Delivered in Lard By Serial Millisecond Crystallography
Other atoms:
Cl (2);
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7clz (Na: 2) - Crystal Structure of ALP1U W187F/Y247F in Complex with Fluostatin C
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7cm8 (Na: 5) - High Resolution Crystal Structure of M92A Mutant of O-Acetyl-L-Serine Sulfhydrylase From Haemophilus Influenzae
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7cmz (Na: 1) - Crystal Structure of BRCT7/8 in Complex with the Aps Motif of PHF8
Other atoms:
K (1);
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7cn7 (Na: 3) - T4 Phage Spackle Protein GP61.3 Complex with Lysozyme Domain of GP5 Tail Lysozyme
Other atoms:
Cl (1);
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7cnw (Na: 2) - Crystal Structure of Apo Psd From E. Coli (1.90 A)
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7cod (Na: 1) - Post Insertion Complex of Dna Polymerase Mu (K438A/Q441A) with 1-Nt Gapped Dna
Other atoms:
Mg (3);
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7coh (Na: 2) - Dimeric Form of Bovine Heart Cytochrome C Oxidase in the Fully Oxidized State
Other atoms:
Mg (2);
Zn (2);
Fe (4);
Cu (6);
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7cp5 (Na: 4) - Bovine Heart Cytochrome C Oxidase in A Catalytic Intermediate of E at 1.76 Angstrom Resolution
Other atoms:
Cu (6);
Fe (4);
Mg (2);
Zn (2);
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7cqo (Na: 1) - Lysozyme Grown in Lcp Soaked with Selenourea For 6 Min
Other atoms:
Cl (5);
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7cre (Na: 1) - Hnrnpk KH3 Domain in Complex with A Ssdna Fragment From the Sirloin Element
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7cuc (Na: 2) - Crystal Structure of Urate Oxidase From Bacillus Sp. Tb-90 in the Absence From Chloride Anion at 1.44 A Resolution
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7cuf (Na: 2) - Crystal Structure of Urate Oxidase From Bacillus Sp. Tb-90 in the Absence From Chloride Anion at 1.44 A Resolution
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7cug (Na: 1) - Crystal Structure of Urate Oxidase From Bacillus Sp. Tb-90 in the Absence From Chloride Anion at 1.62 A Resolution
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7cvj (Na: 1) - Crystal Structure of Lysozyme By Fixed-Target Serial Synchrotron Crystallography (100 Ms)
Other atoms:
Cl (2);
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7cvl (Na: 1) - Crystal Structure of Lysozyme By Fixed-Target Serial Synchrotron Crystallography (500 Ms)
Other atoms:
Cl (2);
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7cw1 (Na: 1) - Crystal Structure of A Biodegradable Plastic-Degrading Cutinase-Like Enzyme From the Phyllosphere Yeast, Pseudozyma Antarctica, Solved By Getting the Phase From Anomalous Scattering of Uncovalently Coordinated Arsenic (Cacodylate).
Other atoms:
As (2);
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7cy1 (Na: 1) - Crystal Structure of Mglc From Myxococcus Xanthus
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7cy3 (Na: 4) - Crystal Structure of A Biodegradable Plastic-Degrading Cutinase From Paraphoma Sp. B47-9.
Other atoms:
As (4);
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7cy9 (Na: 4) - Crystal Structure of A Biodegradable Plastic-Degrading Cutinase From Paraphoma Sp. B47-9 Solved By Getting the Phase From Anomalous Scattering of Uncovalently Coordinated Arsenic (Cacodylate).
Other atoms:
As (3);
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7cyf (Na: 3) - Cryo-Em Structure of Bicarbonate Transporter Sbta in Complex with Pii- Like Signaling Protein Sbtb From Synechocystis Sp. Pcc 6803
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7d0x (Na: 160) - uc(Nmr) Solution Structures of the Dna Minidumbbell Formed By 5'- Mcttgxmcttg-3'
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7d0y (Na: 100) - uc(Nmr) Solution Structures of the Dna Minidumbbell Formed By Two Cmctg Repeats at pH 5
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7d0z (Na: 100) - uc(Nmr) Solution Structures of the Dna Minidumbbell Formed By Two Cctg Repeats at pH 5
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7d12 (Na: 75) - uc(Nmr) Solution Structures of Cag Rna-DB213 Binding Complex
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7d18 (Na: 1) - Crystal Structure of Acidobacteriales Bacterium Glutaminyl Cyclase
Other atoms:
Zn (1);
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7d2a (Na: 1) - CBM32 of Alyq in Complex with 4,5-Unsaturated Mannuronic Acid
Other atoms:
Ca (1);
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7d2r (Na: 1) - Crystal Structure of Agrobacterium Tumefaciens Aconitase X Mutant - S449C/C510V
Other atoms:
Fe (2);
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7d3e (Na: 4) - Cryo-Em Structure of Human DUOX1-DUOXA1 in Low-Calcium State
Other atoms:
Fe (4);
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7d3f (Na: 4) - Cryo-Em Structure of Human DUOX1-DUOXA1 in High-Calcium State
Other atoms:
Fe (4);
Ca (4);
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7d48 (Na: 1) - Apo-Form Cyclic Trinucleotide Synthase Cdnd
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7d5b (Na: 2) - BACE2 Xaperone Complex with N-{3-[(5R)-3-Amino-2,5-Dimethyl-1,1-Dioxo- 5,6-Dihydro-2H-1LAMBDA6,2,4-Thiadiazin-5-Yl]-4-Fluorophenyl}-5- Fluoropyridine-2-Carboxamide
Other atoms:
Cl (1);
F (2);
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7d5e (Na: 1) - Left-Handed G-Quadruplex Containing Two Bulges
Other atoms:
K (7);
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7d5w (Na: 4) - Bovine Heart Cytochrome C Oxidase in A Catalytic Intermediate of O at 1.84 Angstrom Resolution
Other atoms:
Cu (6);
Fe (4);
Mg (2);
Zn (2);
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7d5x (Na: 4) - Bovine Heart Cytochrome C Oxidase in A Catalytic Intermediate, IO10, at 1.74 Angstrom Resolution
Other atoms:
Zn (2);
Mg (2);
Fe (4);
Cu (6);
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7d78 (Na: 1) - The Structure of Thioesterase Dcsb
Other atoms:
Cl (2);
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7d79 (Na: 1) - The Structure of Dcsb Complex with Its Substrate Analogue
Other atoms:
Cl (4);
Page generated: Mon Dec 15 11:16:16 2025
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