Sodium in PDB 8wgg: Crystal Structure of Basal Pilin Pilb From Streptococcus Sanguinis

The structure of Crystal Structure of Basal Pilin Pilb From Streptococcus Sanguinis, PDB code: 8wgg was solved by S.Yadav, P.Parijat, V.Krishnan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.20 / 1.88
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	36.911, 58.63, 212.985, 90, 90, 90
R / Rfree (%)	19.8 / 22.9

The binding sites of Sodium atom in the Crystal Structure of Basal Pilin Pilb From Streptococcus Sanguinis (pdb code 8wgg). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Basal Pilin Pilb From Streptococcus Sanguinis, PDB code: 8wgg:

Sodium binding site 1 out of 1 in the Crystal Structure of Basal Pilin Pilb From Streptococcus Sanguinis


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Basal Pilin Pilb From Streptococcus Sanguinis within 5.0Å range: probe atom residue distance (Å) B Occ A:Na812 b:28.1 occ:1.00 OH A:TYR44 2.5 19.7 1.0 O A:HOH928 2.7 16.5 1.0 O A:HOH1070 2.8 20.4 1.0 CE1 A:HIS42 3.5 15.5 1.0 CZ A:TYR44 3.5 17.8 1.0 ND1 A:HIS42 3.6 14.7 1.0 CE1 A:TYR44 3.7 17.2 1.0 NE2 A:HIS42 3.9 16.4 1.0 N A:SER39 3.9 16.2 1.0 CG A:HIS42 4.0 15.0 1.0 OG A:SER167 4.0 17.1 1.0 O A:HOH1058 4.1 19.0 1.0 CD1 A:ILE165 4.1 13.6 1.0 CD2 A:HIS42 4.1 15.9 1.0 CA A:THR38 4.3 14.5 1.0 CB A:SER167 4.3 17.9 1.0 OG A:SER39 4.4 20.5 1.0 CB A:SER39 4.5 18.9 1.0 CG2 A:ILE165 4.5 13.4 1.0 C A:THR38 4.6 15.7 1.0 CG1 A:ILE165 4.6 13.3 1.0 CA A:SER39 4.7 17.7 1.0 CB A:THR38 4.7 14.0 1.0 CE2 A:TYR44 4.8 17.6 1.0 O A:SER39 4.8 16.6 1.0 CB A:HIS42 4.8 14.6 1.0 O A:GLY37 4.8 15.1 1.0 OD2 A:ASP137 4.9 15.1 1.0 O A:ALA149 4.9 12.4 1.0 OD1 A:ASP137 5.0 15.5 1.0

S.Yadav, P.Parijat, V.Krishnan. Crystal Structure of Basal Pilin Pilb From Streptococcus Sanguinis To Be Published.