Sodium in PDB 7wxs: Lysozyme Protected By Polyacrylamide Gel

All present enzymatic activity of Lysozyme Protected By Polyacrylamide Gel:
3.2.1.17;

The structure of Lysozyme Protected By Polyacrylamide Gel, PDB code: 7wxs was solved by H.Muroyama, F.Tomoike, T.Nagae, T.Okada, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	25.02 / 1.25
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	79.114, 79.114, 37.058, 90, 90, 90
R / Rfree (%)	17.8 / 19.5

The structure of Lysozyme Protected By Polyacrylamide Gel also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Sodium atom in the Lysozyme Protected By Polyacrylamide Gel (pdb code 7wxs). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Lysozyme Protected By Polyacrylamide Gel, PDB code: 7wxs:

Sodium binding site 1 out of 1 in the Lysozyme Protected By Polyacrylamide Gel


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Lysozyme Protected By Polyacrylamide Gel within 5.0Å range: probe atom residue distance (Å) B Occ A:Na201 b:10.6 occ:0.00 O A:SER60 2.3 10.2 1.0 O A:HOH395 2.4 13.9 1.0 O A:ARG73 2.4 11.4 1.0 O A:CYS64 2.4 8.9 1.0 O A:HOH371 2.4 9.7 1.0 OG A:SER72 2.5 12.4 1.0 CB A:SER72 3.2 12.3 1.0 C A:ARG73 3.5 10.7 1.0 C A:CYS64 3.5 7.1 1.0 C A:SER60 3.5 8.2 1.0 N A:ARG73 3.9 12.6 1.0 CA A:ASN65 3.9 9.0 1.0 C A:SER72 4.1 13.4 1.0 CA A:SER60 4.2 9.0 1.0 N A:ASN65 4.2 8.8 1.0 CA A:ARG73 4.3 11.4 1.0 CA A:SER72 4.3 11.5 1.0 CB A:SER60 4.3 8.9 1.0 N A:ASN74 4.4 11.6 1.0 O A:ARG61 4.5 12.2 1.0 N A:CYS64 4.5 8.3 1.0 C A:ARG61 4.5 12.2 1.0 N A:ARG61 4.6 9.1 1.0 O A:HOH435 4.6 30.7 1.0 CA A:ASN74 4.6 10.1 1.0 N A:ASP66 4.6 8.0 1.0 CA A:CYS64 4.6 7.9 1.0 O A:HOH427 4.7 3.8 1.0 O A:SER72 4.7 14.4 1.0 OD1 A:ASN65 4.7 11.1 1.0 CB A:THR69 4.7 9.8 1.0 CB A:ASN74 4.8 10.7 1.0 CA A:ARG61 4.8 10.1 1.0 CB A:ASN65 4.8 10.4 1.0 C A:ASN65 4.8 7.8 1.0 N A:TRP62 4.9 10.1 1.0

H.Muroyama, S.Kato, T.Itabashi, T.Nagae, T.Okada, F.Tomoike. Post-Crystallization Protection of Protein Crystals By Polyacrylamide To Be Published.