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Sodium in PDB 7tum: Multi-Hit Sfx Using Mhz Xfel Sources- First Hit

Enzymatic activity of Multi-Hit Sfx Using Mhz Xfel Sources- First Hit

All present enzymatic activity of Multi-Hit Sfx Using Mhz Xfel Sources- First Hit:
3.2.1.17;

Protein crystallography data

The structure of Multi-Hit Sfx Using Mhz Xfel Sources- First Hit, PDB code: 7tum was solved by C.Darmanin, S.Holmes, B.Abbey, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.49 / 3.20
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 79.3, 79.3, 37.73, 90, 90, 90
R / Rfree (%) 31.4 / 42.6

Sodium Binding Sites:

The binding sites of Sodium atom in the Multi-Hit Sfx Using Mhz Xfel Sources- First Hit (pdb code 7tum). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Multi-Hit Sfx Using Mhz Xfel Sources- First Hit, PDB code: 7tum:

Sodium binding site 1 out of 1 in 7tum

Go back to Sodium Binding Sites List in 7tum
Sodium binding site 1 out of 1 in the Multi-Hit Sfx Using Mhz Xfel Sources- First Hit


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Multi-Hit Sfx Using Mhz Xfel Sources- First Hit within 5.0Å range:

Reference:

S.Holmes, H.J.Kirkwood, R.Bean, K.Giewekemeyer, A.V.Martin, M.Hadian-Jazi, M.O.Wiedorn, D.Oberthur, H.Marman, L.Adriano, N.Al-Qudami, S.Bajt, I.Barak, S.Bari, J.Bielecki, S.Brockhauser, M.A.Coleman, F.Cruz-Mazo, C.Danilevski, K.Dorner, A.M.Ganan-Calvo, R.Graceffa, H.Fanghor, M.Heymann, M.Frank, A.Kaukher, Y.Kim, B.Kobe, J.Knoska, T.Laurus, R.Letrun, L.Maia, M.Messerschmidt, M.Metz, T.Michelat, G.Mills, S.Molodtsov, D.C.F.Monteiro, A.J.Morgan, A.Munnich, G.E.Pena Murillo, G.Previtali, A.Round, T.Sato, R.Schubert, J.Schulz, M.Shelby, C.Seuring, J.A.Sellberg, M.Sikorski, A.Silenzi, S.Stern, J.Sztuk-Dambietz, J.Szuba, M.Trebbin, P.Vagovic, T.Ve, B.Weinhausen, K.Wrona, P.L.Xavier, C.Xu, O.Yefanov, K.A.Nugent, H.N.Chapman, A.P.Mancuso, A.Barty, B.Abbey, C.Darmanin. Megahertz Pulse Trains Enable Multi-Hit Serial Femtosecond Crystallography Experiments at X-Ray Free Electron Lasers. Nat Commun V. 13 4708 2022.
ISSN: ESSN 2041-1723
PubMed: 35953469
DOI: 10.1038/S41467-022-32434-6
Page generated: Mon Aug 18 12:05:11 2025

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