Sodium »
PDB 7p0v-7puf »
7p9q »
Sodium in PDB 7p9q: Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn.
Protein crystallography data
The structure of Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn., PDB code: 7p9q
was solved by
D.Gahloth,
D.Leys,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 43.42 / 2.53 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 104.2, 195.45, 105.21, 90, 116.35, 90 |
| R / Rfree (%) | 18.4 / 22.1 |
Other elements in 7p9q:
The structure of Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn. also contains other interesting chemical elements:
| Manganese | (Mn) | 6 atoms |
Sodium Binding Sites:
The binding sites of Sodium atom in the Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn.
(pdb code 7p9q). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total 6 binding sites of Sodium where determined in the Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn., PDB code: 7p9q:
Jump to Sodium binding site number: 1; 2; 3; 4; 5; 6;
In total 6 binding sites of Sodium where determined in the Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn., PDB code: 7p9q:
Jump to Sodium binding site number: 1; 2; 3; 4; 5; 6;
Sodium binding site 1 out of 6 in 7p9q
Go back to
Sodium Binding Sites List in 7p9q
Sodium binding site 1 out
of 6 in the Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 1 of Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn. within 5.0Å range:
|
Sodium binding site 2 out of 6 in 7p9q
Go back to
Sodium Binding Sites List in 7p9q
Sodium binding site 2 out
of 6 in the Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 2 of Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn. within 5.0Å range:
|
Sodium binding site 3 out of 6 in 7p9q
Go back to
Sodium Binding Sites List in 7p9q
Sodium binding site 3 out
of 6 in the Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 3 of Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn. within 5.0Å range:
|
Sodium binding site 4 out of 6 in 7p9q
Go back to
Sodium Binding Sites List in 7p9q
Sodium binding site 4 out
of 6 in the Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 4 of Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn. within 5.0Å range:
|
Sodium binding site 5 out of 6 in 7p9q
Go back to
Sodium Binding Sites List in 7p9q
Sodium binding site 5 out
of 6 in the Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 5 of Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn. within 5.0Å range:
|
Sodium binding site 6 out of 6 in 7p9q
Go back to
Sodium Binding Sites List in 7p9q
Sodium binding site 6 out
of 6 in the Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 6 of Crystal Structure of Indole 3-Carboxylic Acid Decarboxylase From Arthrobacter Nicotianae FI1612 in Complex with Co-Factor Prfmn. within 5.0Å range:
|
Reference:
D.Gahloth,
K.Fisher,
K.A.P.Payne,
M.Cliff,
C.Levy,
D.Leys.
Structural and Biochemical Characterization of the Prenylated Flavin Mononucleotide-Dependent Indole-3-Carboxylic Acid Decarboxylase. J.Biol.Chem. V. 298 01771 2022.
ISSN: ESSN 1083-351X
PubMed: 35218772
DOI: 10.1016/J.JBC.2022.101771
Page generated: Mon Aug 18 11:21:16 2025
ISSN: ESSN 1083-351X
PubMed: 35218772
DOI: 10.1016/J.JBC.2022.101771
Last articles
Mn in 9LJUMn in 9LJW
Mn in 9LJS
Mn in 9LJR
Mn in 9LJT
Mn in 9LJV
Mg in 9UA2
Mg in 9R96
Mg in 9VM1
Mg in 9P01
