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Sodium in PDB 6jki: Crystal Structure and Catalytic Mechanism of the Essential M1G37 Trna Methyltransferase Trmd From Pseudomonas Aeruginosa
Enzymatic activity of Crystal Structure and Catalytic Mechanism of the Essential M1G37 Trna Methyltransferase Trmd From Pseudomonas Aeruginosa
All present enzymatic activity of Crystal Structure and Catalytic Mechanism of the Essential M1G37 Trna Methyltransferase Trmd From Pseudomonas Aeruginosa:
2.1.1.228;
2.1.1.228;
Protein crystallography data
The structure of Crystal Structure and Catalytic Mechanism of the Essential M1G37 Trna Methyltransferase Trmd From Pseudomonas Aeruginosa, PDB code: 6jki
was solved by
J.Jaroensuk,
C.W.Liew,
S.Atichartpongkul,
Y.H.Chionh,
Y.H.Wong,
W.H.Zhong,
M.E.Mcbee,
N.Thongdee,
E.G.Prestwich,
M.S.Demott,
S.Mongkolsuk,
P.C.Dedon,
J.Lescar,
M.Fuangthong,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 24.73 / 2.59 |
| Space group | P 32 2 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 85.670, 85.670, 147.600, 90.00, 90.00, 120.00 |
| R / Rfree (%) | 20.7 / 25.1 |
Other elements in 6jki:
The structure of Crystal Structure and Catalytic Mechanism of the Essential M1G37 Trna Methyltransferase Trmd From Pseudomonas Aeruginosa also contains other interesting chemical elements:
| Manganese | (Mn) | 3 atoms |
Sodium Binding Sites:
The binding sites of Sodium atom in the Crystal Structure and Catalytic Mechanism of the Essential M1G37 Trna Methyltransferase Trmd From Pseudomonas Aeruginosa
(pdb code 6jki). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the Crystal Structure and Catalytic Mechanism of the Essential M1G37 Trna Methyltransferase Trmd From Pseudomonas Aeruginosa, PDB code: 6jki:
Jump to Sodium binding site number: 1; 2;
In total 2 binding sites of Sodium where determined in the Crystal Structure and Catalytic Mechanism of the Essential M1G37 Trna Methyltransferase Trmd From Pseudomonas Aeruginosa, PDB code: 6jki:
Jump to Sodium binding site number: 1; 2;
Sodium binding site 1 out of 2 in 6jki
Go back to
Sodium Binding Sites List in 6jki
Sodium binding site 1 out
of 2 in the Crystal Structure and Catalytic Mechanism of the Essential M1G37 Trna Methyltransferase Trmd From Pseudomonas Aeruginosa
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 1 of Crystal Structure and Catalytic Mechanism of the Essential M1G37 Trna Methyltransferase Trmd From Pseudomonas Aeruginosa within 5.0Å range:
|
Sodium binding site 2 out of 2 in 6jki
Go back to
Sodium Binding Sites List in 6jki
Sodium binding site 2 out
of 2 in the Crystal Structure and Catalytic Mechanism of the Essential M1G37 Trna Methyltransferase Trmd From Pseudomonas Aeruginosa
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 2 of Crystal Structure and Catalytic Mechanism of the Essential M1G37 Trna Methyltransferase Trmd From Pseudomonas Aeruginosa within 5.0Å range:
|
Reference:
J.Jaroensuk,
Y.H.Wong,
W.Zhong,
C.W.Liew,
S.Maenpuen,
A.E.Sahili,
S.Atichartpongkul,
Y.H.Chionh,
Q.Nah,
N.Thongdee,
M.E.Mcbee,
E.G.Prestwich,
M.S.Demott,
P.Chaiyen,
S.Mongkolsuk,
P.C.Dedon,
J.Lescar,
M.Fuangthong.
Crystal Structure and Catalytic Mechanism of the Essential M1G37 Trna Methyltransferase Trmd Frompseudomonas Aeruginosa. Rna V. 25 1481 2019.
ISSN: ESSN 1469-9001
PubMed: 31399541
DOI: 10.1261/RNA.066746.118
Page generated: Tue Oct 8 11:26:52 2024
ISSN: ESSN 1469-9001
PubMed: 31399541
DOI: 10.1261/RNA.066746.118
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