Sodium in PDB 6fak: Human Afamin Orthorhombic Crystal Form By Controlled Hydration

The structure of Human Afamin Orthorhombic Crystal Form By Controlled Hydration, PDB code: 6fak was solved by B.Rupp, A.Naschberger, M.W.Bowler, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	78.85 / 1.90
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	109.773, 113.325, 48.796, 90.00, 90.00, 90.00
R / Rfree (%)	17.7 / 21.9

The structure of Human Afamin Orthorhombic Crystal Form By Controlled Hydration also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Sodium atom in the Human Afamin Orthorhombic Crystal Form By Controlled Hydration (pdb code 6fak). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Human Afamin Orthorhombic Crystal Form By Controlled Hydration, PDB code: 6fak:

Sodium binding site 1 out of 1 in the Human Afamin Orthorhombic Crystal Form By Controlled Hydration


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Human Afamin Orthorhombic Crystal Form By Controlled Hydration within 5.0Å range: probe atom residue distance (Å) B Occ A:Na802 b:45.7 occ:1.00 O A:HOH1013 2.4 46.3 1.0 O A:LEU115 2.5 34.5 1.0 O A:GLY113 2.5 33.6 1.0 C A:LEU115 3.5 33.8 1.0 C A:GLY113 3.6 33.1 1.0 N A:LEU115 4.2 31.4 1.0 CA A:PRO116 4.2 36.4 1.0 N A:PRO116 4.3 35.7 1.0 CA A:GLY113 4.3 32.7 1.0 C A:PHE114 4.4 32.7 1.0 CA A:LEU115 4.5 31.6 1.0 C A:PRO116 4.6 38.2 1.0 N A:PHE114 4.6 31.7 1.0 O A:HOH1104 4.6 60.6 1.0 CA A:PHE114 4.7 32.2 1.0 O A:PHE114 4.8 34.9 1.0 N A:PRO117 4.9 43.1 1.0

B.Rupp, A.Naschberger, M.W.Bowler. Human Afamin Orthorhombic Crystal Form To Be Published.