Sodium in PDB 5mjg: Single-Shot Pink Beam Serial Crystallography: Thaumatin

The structure of Single-Shot Pink Beam Serial Crystallography: Thaumatin, PDB code: 5mjg was solved by A.Meents, D.Oberthuer, J.Lieske, V.Srajer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	14.98 / 2.10
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	58.400, 58.400, 152.100, 90.00, 90.00, 90.00
R / Rfree (%)	15.4 / 20

The binding sites of Sodium atom in the Single-Shot Pink Beam Serial Crystallography: Thaumatin (pdb code 5mjg). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Single-Shot Pink Beam Serial Crystallography: Thaumatin, PDB code: 5mjg:

Sodium binding site 1 out of 1 in the Single-Shot Pink Beam Serial Crystallography: Thaumatin


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Single-Shot Pink Beam Serial Crystallography: Thaumatin within 5.0Å range: probe atom residue distance (Å) B Occ A:Na302 b:68.2 occ:1.00 HG A:SER103 2.1 18.4 1.0 OE2 A:GLU89 2.4 9.8 1.0 O A:HOH522 2.7 57.2 1.0 HD12 A:ILE105 2.9 10.1 1.0 OG A:SER103 3.0 15.3 1.0 HB A:ILE105 3.1 10.2 1.0 CD A:GLU89 3.3 10.0 1.0 HZ2 A:LYS49 3.4 11.9 1.0 OE1 A:GLU89 3.4 10.0 1.0 HB2 A:SER103 3.5 16.7 1.0 HB3 A:SER103 3.6 16.7 1.0 CB A:SER103 3.6 13.9 1.0 HD12 A:LEU87 3.7 12.4 1.0 CD1 A:ILE105 3.8 8.4 1.0 HZ1 A:LYS49 3.8 11.9 1.0 CB A:ILE105 3.9 8.5 1.0 HG21 A:ILE105 3.9 10.8 1.0 HD13 A:ILE105 3.9 10.1 1.0 O A:HOH551 4.0 28.2 1.0 HD13 A:LEU87 4.0 12.4 1.0 NZ A:LYS49 4.1 9.9 1.0 HG2 A:LYS106 4.2 21.1 1.0 CG1 A:ILE105 4.3 8.4 1.0 CD1 A:LEU87 4.3 10.4 1.0 CG2 A:ILE105 4.3 9.0 1.0 HG13 A:ILE105 4.5 10.1 1.0 HD11 A:ILE105 4.5 10.1 1.0 HG22 A:ILE105 4.5 10.8 1.0 H A:ILE105 4.6 9.8 1.0 HZ3 A:LYS49 4.6 11.9 1.0 CG A:GLU89 4.6 10.6 1.0 HD11 A:LEU87 4.8 12.4 1.0 O A:HOH506 4.8 20.1 1.0 HG2 A:GLU89 4.8 12.7 1.0 HE3 A:LYS49 4.9 10.8 1.0 HB2 A:LEU87 4.9 10.1 1.0 HG3 A:GLU89 4.9 12.7 1.0 HG3 A:LYS106 5.0 21.1 1.0

A.Meents, D.Oberthuer, J.Lieske, V.Srajer. Single-Shot Pink Beam Serial Crystallography: Thaumatin To Be Published.