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Sodium in PDB 5jos: Crystal Structure of An Ancestral Cyclohexadienyl Dehydratase, Anccdt- 3(P188L).

Enzymatic activity of Crystal Structure of An Ancestral Cyclohexadienyl Dehydratase, Anccdt- 3(P188L).

All present enzymatic activity of Crystal Structure of An Ancestral Cyclohexadienyl Dehydratase, Anccdt- 3(P188L).:
4.2.1.51; 4.2.1.91;

Protein crystallography data

The structure of Crystal Structure of An Ancestral Cyclohexadienyl Dehydratase, Anccdt- 3(P188L)., PDB code: 5jos was solved by B.E.Clifton, P.D.Carr, C.J.Jackson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.35 / 2.10
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 90.370, 90.370, 101.810, 90.00, 90.00, 90.00
R / Rfree (%) 17.6 / 20.7

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of An Ancestral Cyclohexadienyl Dehydratase, Anccdt- 3(P188L). (pdb code 5jos). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of An Ancestral Cyclohexadienyl Dehydratase, Anccdt- 3(P188L)., PDB code: 5jos:

Sodium binding site 1 out of 1 in 5jos

Go back to Sodium Binding Sites List in 5jos
Sodium binding site 1 out of 1 in the Crystal Structure of An Ancestral Cyclohexadienyl Dehydratase, Anccdt- 3(P188L).


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of An Ancestral Cyclohexadienyl Dehydratase, Anccdt- 3(P188L). within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na301

b:37.3
occ:1.00
O A:ALA189 2.3 40.8 1.0
O A:HOH463 2.3 36.0 1.0
O A:HIS192 2.3 34.8 1.0
O A:HOH458 2.4 37.1 1.0
O A:LEU195 2.5 36.7 1.0
C A:HIS192 3.4 39.7 1.0
C A:ALA189 3.4 38.7 1.0
C A:LEU195 3.7 34.9 1.0
CA A:PRO193 3.9 38.9 1.0
CA A:ALA189 4.0 35.2 1.0
N A:LEU195 4.1 34.0 1.0
C A:PRO193 4.1 36.8 1.0
N A:PRO193 4.1 37.7 1.0
O A:PRO193 4.3 37.7 1.0
N A:HIS192 4.3 38.1 1.0
CB A:ALA189 4.4 36.9 1.0
CA A:LEU195 4.4 34.0 1.0
CA A:HIS192 4.4 38.5 1.0
N A:LYS190 4.5 32.8 1.0
CA A:LYS190 4.5 35.9 1.0
O A:LYS190 4.5 38.7 1.0
C A:LYS190 4.5 38.2 1.0
N A:GLY194 4.6 36.6 1.0
N A:ALA196 4.8 33.1 1.0
O A:HOH422 4.8 39.9 1.0
CB A:LEU195 4.9 32.7 1.0

Reference:

B.E.Clifton, J.A.Kaczmarski, P.D.Carr, C.J.Jackson. To Be Published To Be Published.
Page generated: Mon Aug 18 00:32:39 2025

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