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Sodium in PDB 5hzr: Crystal Structure of MTSNF2

Protein crystallography data

The structure of Crystal Structure of MTSNF2, PDB code: 5hzr was solved by Z.C.Chen, X.Xia, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.77 / 2.33
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 122.613, 144.266, 121.290, 90.00, 90.00, 90.00
R / Rfree (%) 19.4 / 21.3

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of MTSNF2 (pdb code 5hzr). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of MTSNF2, PDB code: 5hzr:

Sodium binding site 1 out of 1 in 5hzr

Go back to Sodium Binding Sites List in 5hzr
Sodium binding site 1 out of 1 in the Crystal Structure of MTSNF2


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of MTSNF2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na1205

b:0.9
occ:1.00
OE2 A:GLU682 3.4 97.0 1.0
OG A:SER694 3.5 83.1 1.0
CB A:PHE727 4.3 43.0 1.0
O A:ALA723 4.4 51.4 1.0
CG A:PHE727 4.5 43.9 1.0
CD A:GLU682 4.6 96.3 1.0
CD1 A:ILE680 4.7 48.4 1.0
CD1 A:PHE727 4.8 45.3 1.0
CD2 A:LEU693 4.8 64.5 1.0
CB A:SER694 4.8 79.7 1.0
C A:ALA723 4.9 50.9 1.0
CB A:ALA723 4.9 51.4 1.0

Reference:

X.Xia, X.Liu, T.Li, X.Fang, Z.C.Chen. Structure of Chromatin Remodeler SWI2/SNF2 in the Resting State Nat.Struct.Mol.Biol. V. 23 722 2016.
ISSN: ESSN 1545-9985
PubMed: 27399259
DOI: 10.1038/NSMB.3259
Page generated: Mon Oct 7 21:30:50 2024

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