Sodium in PDB 5g3c: Preserving Metallic Sites Affected By Radiation Damage the CUT2 Case in Thermus Termophilus Multicopper Oxidase

Enzymatic activity of Preserving Metallic Sites Affected By Radiation Damage the CUT2 Case in Thermus Termophilus Multicopper Oxidase

All present enzymatic activity of Preserving Metallic Sites Affected By Radiation Damage the CUT2 Case in Thermus Termophilus Multicopper Oxidase:
1.10.3.2;

Protein crystallography data

The structure of Preserving Metallic Sites Affected By Radiation Damage the CUT2 Case in Thermus Termophilus Multicopper Oxidase, PDB code: 5g3c was solved by R.Ruiz-Arellano, A.Diaz, E.Rosas, E.Rudino, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	19.66 / 1.75
*Space group*	C 2 2 2₁
*Cell size a, b, c (Å), α, β, γ (°)*	93.744, 110.332, 96.484, 90.00, 90.00, 90.00
*R / R_free (%)*	13.6 / 16.6

Other elements in 5g3c:

The structure of Preserving Metallic Sites Affected By Radiation Damage the CUT2 Case in Thermus Termophilus Multicopper Oxidase also contains other interesting chemical elements:

Copper

(Cu)

3 atoms

Sodium Binding Sites:

The binding sites of Sodium atom in the Preserving Metallic Sites Affected By Radiation Damage the CUT2 Case in Thermus Termophilus Multicopper Oxidase (pdb code 5g3c). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Preserving Metallic Sites Affected By Radiation Damage the CUT2 Case in Thermus Termophilus Multicopper Oxidase, PDB code: 5g3c:

Sodium binding site 1 out of 1 in 5g3c

Go back to

Sodium Binding Sites List in 5g3c

Sodium binding site 1 out of 1 in the Preserving Metallic Sites Affected By Radiation Damage the CUT2 Case in Thermus Termophilus Multicopper Oxidase

Mono view

Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Preserving Metallic Sites Affected By Radiation Damage the CUT2 Case in Thermus Termophilus Multicopper Oxidase within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Na1476 b:38.3 occ:1.00	O	A:HOH2538	2.5	42.0	1.0
	O	A:HOH2064	2.5	11.9	1.0
	O	A:HOH2069	2.6	29.0	1.0
	OG1	A:THR47	3.5	18.0	1.0
	CB	A:THR47	3.7	15.4	1.0
	N	A:GLY65	3.8	10.8	1.0
	O	A:HOH2047	4.1	37.7	1.0
	CA	A:GLY65	4.1	10.4	1.0
	CB	A:SER45	4.1	15.3	1.0
	O	A:HOH2063	4.1	27.9	1.0
	O	A:HOH2142	4.1	44.6	1.0
	CG2	A:THR47	4.3	20.4	1.0
	O	A:SER45	4.3	11.6	1.0
	OG1	A:THR49	4.5	12.2	0.1
	C	A:GLY64	4.5	12.5	1.0
	CG2	A:THR49	4.6	12.1	0.9
	N	A:GLY64	4.8	12.8	1.0
	C	A:SER45	4.9	11.9	1.0
	OG1	A:THR62	4.9	11.6	1.0
	CA	A:GLY64	4.9	10.8	1.0
	OG	A:SER45	4.9	31.8	1.0

Reference:

R.Ruiz-Arellano, A.Diaz, E.Rosas, V.Stojanoff, E.Rudino. Preserving Metallic Sites Affected By Radiation Damage the CUT2 Case in Thermus Thermophilus Multicopper Oxidase To Be Published.

Page generated: Mon Oct 7 21:08:39 2024

Last articles

Hg in 1CC8
Hg in 1CA3
Hg in 1BV3
Hg in 1BNW
Hg in 1BNV
Hg in 1BNU
Hg in 1BNT
Hg in 1BNQ
Hg in 1BNN
Hg in 1ARO

	© Copyright 2008-2020 by atomistry.com
Home \| Site Map \| Copyright \| Contact us \| Privacy