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Sodium in PDB 5fdj: Hen Egg Lysozyme at Room Temperature Solved From Datasets Acquired By Ultrasonic Acoustic Levitation Method and Processed By Crystfel
Enzymatic activity of Hen Egg Lysozyme at Room Temperature Solved From Datasets Acquired By Ultrasonic Acoustic Levitation Method and Processed By Crystfel
All present enzymatic activity of Hen Egg Lysozyme at Room Temperature Solved From Datasets Acquired By Ultrasonic Acoustic Levitation Method and Processed By Crystfel:
3.2.1.17;
3.2.1.17;
Protein crystallography data
The structure of Hen Egg Lysozyme at Room Temperature Solved From Datasets Acquired By Ultrasonic Acoustic Levitation Method and Processed By Crystfel, PDB code: 5fdj
was solved by
S.Tsujino,
T.Tomizaki,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 39.30 / 1.80 |
| Space group | P 43 21 2 |
| Cell size a, b, c (Å), α, β, γ (°) | 78.600, 78.600, 37.400, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 17.9 / 22 |
Other elements in 5fdj:
The structure of Hen Egg Lysozyme at Room Temperature Solved From Datasets Acquired By Ultrasonic Acoustic Levitation Method and Processed By Crystfel also contains other interesting chemical elements:
| Chlorine | (Cl) | 2 atoms |
Sodium Binding Sites:
The binding sites of Sodium atom in the Hen Egg Lysozyme at Room Temperature Solved From Datasets Acquired By Ultrasonic Acoustic Levitation Method and Processed By Crystfel
(pdb code 5fdj). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the Hen Egg Lysozyme at Room Temperature Solved From Datasets Acquired By Ultrasonic Acoustic Levitation Method and Processed By Crystfel, PDB code: 5fdj:
Jump to Sodium binding site number: 1; 2;
In total 2 binding sites of Sodium where determined in the Hen Egg Lysozyme at Room Temperature Solved From Datasets Acquired By Ultrasonic Acoustic Levitation Method and Processed By Crystfel, PDB code: 5fdj:
Jump to Sodium binding site number: 1; 2;
Sodium binding site 1 out of 2 in 5fdj
Go back to
Sodium Binding Sites List in 5fdj
Sodium binding site 1 out
of 2 in the Hen Egg Lysozyme at Room Temperature Solved From Datasets Acquired By Ultrasonic Acoustic Levitation Method and Processed By Crystfel
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 1 of Hen Egg Lysozyme at Room Temperature Solved From Datasets Acquired By Ultrasonic Acoustic Levitation Method and Processed By Crystfel within 5.0Å range:
|
Sodium binding site 2 out of 2 in 5fdj
Go back to
Sodium Binding Sites List in 5fdj
Sodium binding site 2 out
of 2 in the Hen Egg Lysozyme at Room Temperature Solved From Datasets Acquired By Ultrasonic Acoustic Levitation Method and Processed By Crystfel
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 2 of Hen Egg Lysozyme at Room Temperature Solved From Datasets Acquired By Ultrasonic Acoustic Levitation Method and Processed By Crystfel within 5.0Å range:
|
Reference:
S.Tsujino,
T.Tomizaki.
Ultrasonic Acoustic Levitation For Fast Frame Rate X-Ray Protein Crystallography at Room Temperature. Sci Rep V. 6 25558 2016.
ISSN: ESSN 2045-2322
PubMed: 27150272
DOI: 10.1038/SREP25558
Page generated: Sun Aug 17 23:48:31 2025
ISSN: ESSN 2045-2322
PubMed: 27150272
DOI: 10.1038/SREP25558
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