Atomistry » Sodium » PDB 5dyn-5emg » 5e56
Atomistry »
  Sodium »
    PDB 5dyn-5emg »
      5e56 »

Sodium in PDB 5e56: Crystal Structure of Mouse Ctla-4

Protein crystallography data

The structure of Crystal Structure of Mouse Ctla-4, PDB code: 5e56 was solved by A.A.Fedorov, E.V.Fedorov, D.Samanta, J.B.Bonanno, S.C.Almo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.81 / 1.50
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 47.538, 36.598, 65.149, 90.00, 105.13, 90.00
R / Rfree (%) 18 / 20.3

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of Mouse Ctla-4 (pdb code 5e56). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Mouse Ctla-4, PDB code: 5e56:

Sodium binding site 1 out of 1 in 5e56

Go back to Sodium Binding Sites List in 5e56
Sodium binding site 1 out of 1 in the Crystal Structure of Mouse Ctla-4


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Mouse Ctla-4 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na201

b:24.0
occ:1.00
O A:TYR63 2.2 30.2 1.0
O A:CYS66 2.3 25.1 1.0
O A:HOH367 2.4 38.5 1.0
O A:PHE60 2.4 25.6 1.0
C A:TYR63 3.4 30.0 1.0
C A:CYS66 3.5 26.6 1.0
C A:PHE60 3.5 23.8 1.0
OG A:SER67 3.9 44.9 1.0
CB A:PHE60 4.1 22.0 1.0
N A:TYR63 4.2 26.3 1.0
CA A:LEU61 4.2 25.1 1.0
CA A:SER67 4.3 27.0 1.0
CA A:TYR63 4.3 28.9 1.0
N A:CYS66 4.3 25.6 1.0
N A:SER67 4.3 25.0 1.0
N A:LEU61 4.3 23.0 1.0
N A:PRO64 4.3 30.3 1.0
CA A:PRO64 4.4 29.7 1.0
C A:LEU61 4.4 25.5 1.0
C A:PRO64 4.4 31.8 1.0
CA A:CYS66 4.5 21.8 1.0
CA A:PHE60 4.5 20.9 1.0
O A:LEU61 4.5 31.2 1.0
CB A:TYR63 4.6 25.7 1.0
O A:PRO64 4.6 39.8 1.0
CB A:SER67 4.6 33.8 1.0
O A:GLY59 4.6 25.4 1.0
N A:PHE65 4.8 27.1 0.5
O A:HOH317 4.8 29.7 1.0
N A:PHE65 4.8 28.0 0.5
N A:ASP62 5.0 25.7 1.0

Reference:

A.A.Fedorov, E.V.Fedorov, D.Samanta, J.B.Bonanno, S.C.Almo. Crystal Structure of Mouse Ctla-4 To Be Published.
Page generated: Sun Aug 17 23:34:50 2025

Last articles

Zn in 4FW7
Zn in 4FWE
Zn in 4FWF
Zn in 4FW5
Zn in 4FW6
Zn in 4FW3
Zn in 4FW4
Zn in 4FVX
Zn in 4FVY
Zn in 4FW0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy