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Sodium in PDB 4z0o: Cw-Type Zinc Finger of ZCWPW2 with F78D Mutation

Protein crystallography data

The structure of Cw-Type Zinc Finger of ZCWPW2 with F78D Mutation, PDB code: 4z0o was solved by Y.Liu, W.Tempel, C.Bountra, C.H.Arrowsmith, A.M.Edwards, J.Min, Structuralgenomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.57
Space group P 3 2 1
Cell size a, b, c (Å), α, β, γ (°) 47.569, 47.569, 48.960, 90.00, 90.00, 120.00
R / Rfree (%) 16.4 / 18.6

Other elements in 4z0o:

The structure of Cw-Type Zinc Finger of ZCWPW2 with F78D Mutation also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Sodium Binding Sites:

The binding sites of Sodium atom in the Cw-Type Zinc Finger of ZCWPW2 with F78D Mutation (pdb code 4z0o). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Cw-Type Zinc Finger of ZCWPW2 with F78D Mutation, PDB code: 4z0o:

Sodium binding site 1 out of 1 in 4z0o

Go back to Sodium Binding Sites List in 4z0o
Sodium binding site 1 out of 1 in the Cw-Type Zinc Finger of ZCWPW2 with F78D Mutation


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Cw-Type Zinc Finger of ZCWPW2 with F78D Mutation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na1002

b:15.2
occ:0.33
O A:HOH1128 2.4 16.0 1.0
OD1 A:ASN37 2.5 10.4 1.0
CG A:ASN37 3.4 12.0 1.0
ND2 A:ASN37 3.6 14.8 1.0
O A:HOH1117 3.8 11.4 0.3
OE2 A:GLU36 4.6 18.1 1.0
CB A:ASN37 4.8 9.8 1.0
CG A:GLU36 4.9 12.7 1.0

Reference:

Y.Liu, W.Tempel, C.Bountra, C.H.Arrowsmith, A.M.Edwards, J.Min. Cw-Type Zinc Finger of ZCWPW2 with F78D Mutation To Be Published.
Page generated: Sun Aug 17 22:41:36 2025

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