Sodium in PDB 4xhf: Crystal Structure of Shewanella Oneidensis Nqrc

The structure of Crystal Structure of Shewanella Oneidensis Nqrc, PDB code: 4xhf was solved by D.R.Tomchick, C.A.Brautigam, R.K.Deka, M.V.Norgard, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	33.71 / 1.76
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	70.914, 93.476, 71.139, 90.00, 100.24, 90.00
R / Rfree (%)	16.6 / 20.2

The binding sites of Sodium atom in the Crystal Structure of Shewanella Oneidensis Nqrc (pdb code 4xhf). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Shewanella Oneidensis Nqrc, PDB code: 4xhf:

Sodium binding site 1 out of 1 in the Crystal Structure of Shewanella Oneidensis Nqrc


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Shewanella Oneidensis Nqrc within 5.0Å range: probe atom residue distance (Å) B Occ D:Na302 b:16.5 occ:1.00 O D:GLY175 2.2 13.3 1.0 O D:HOH412 2.5 11.2 1.0 C D:GLY175 3.2 12.8 1.0 HA D:ILE176 3.5 16.6 1.0 HA2 D:GLY175 3.7 17.8 1.0 N D:ILE176 4.0 13.2 1.0 CA D:GLY175 4.1 14.8 1.0 O D:HOH452 4.1 34.6 1.0 CA D:ILE176 4.1 13.8 1.0 O D:ILE176 4.3 15.3 1.0 O D:HOH423 4.3 15.7 1.0 HB3 D:PHE179 4.4 13.2 1.0 HA3 D:GLY175 4.6 17.8 1.0 C D:ILE176 4.7 13.5 1.0 HG11 D:VAL221 4.7 18.4 1.0 H D:ILE176 4.8 15.8 1.0 OD1 D:ASP178 4.9 16.4 1.0

R.K.Deka, C.A.Brautigam, W.Z.Liu, D.R.Tomchick, M.V.Norgard. Molecular Insights Into the Enzymatic Diversity of Flavin-Trafficking Protein (Ftp; Formerly Apbe) in Flavoprotein Biogenesis in the Bacterial Periplasm. Microbiologyopen V. 5 21 2016.
ISSN: ESSN 2045-8827
PubMed: 26626129
DOI: 10.1002/MBO3.306