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Sodium in PDB 4v35: The Structure of A-Pgs From Pseudomonas Aeruginosa

Enzymatic activity of The Structure of A-Pgs From Pseudomonas Aeruginosa

All present enzymatic activity of The Structure of A-Pgs From Pseudomonas Aeruginosa:
2.3.2.11;

Protein crystallography data

The structure of The Structure of A-Pgs From Pseudomonas Aeruginosa, PDB code: 4v35 was solved by J.Krausze, S.Hebecker, T.Hasenkampf, D.W.Heinz, J.Moser, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.695 / 2.30
Space group P 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 94.180, 94.180, 166.860, 90.00, 90.00, 90.00
R / Rfree (%) 17.46 / 19.85

Other elements in 4v35:

The structure of The Structure of A-Pgs From Pseudomonas Aeruginosa also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms
Calcium (Ca) 1 atom

Sodium Binding Sites:

The binding sites of Sodium atom in the The Structure of A-Pgs From Pseudomonas Aeruginosa (pdb code 4v35). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the The Structure of A-Pgs From Pseudomonas Aeruginosa, PDB code: 4v35:

Sodium binding site 1 out of 1 in 4v35

Go back to Sodium Binding Sites List in 4v35
Sodium binding site 1 out of 1 in the The Structure of A-Pgs From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of The Structure of A-Pgs From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na1885

b:75.9
occ:1.00
OE1 A:GLU616 3.0 48.3 1.0
OE2 A:GLU616 3.6 57.4 1.0
CD A:GLU616 3.7 48.1 1.0
CE1 A:HIS585 4.0 38.9 1.0
NE2 A:HIS585 4.2 45.2 1.0
CG A:MET612 4.4 40.9 1.0
CD A:GLN613 4.4 58.8 1.0
NE2 A:GLN613 4.5 68.7 1.0
CG A:GLN613 4.6 38.3 1.0
OE1 A:GLN613 4.7 64.5 1.0

Reference:

S.Hebecker, J.Krausze, T.Hasenkampf, J.Schneider, M.Groenewold, J.Reichelt, D.Jahn, D.W.Heinz, J.Moser. Structures of Two Bacterial Resistance Factors Mediating Trna-Dependent Aminoacylation of Phosphatidylglycerol with Lysine or Alanine. Proc.Natl.Acad.Sci.Usa V. 112 10691 2015.
ISSN: ISSN 0027-8424
PubMed: 26261323
DOI: 10.1073/PNAS.1511167112
Page generated: Mon Oct 7 18:48:58 2024

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