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Sodium in PDB 4noi: 2.17 Angstrom Crystal Structure of Dna-Directed Rna Polymerase Subunit Alpha From Campylobacter Jejuni.

Enzymatic activity of 2.17 Angstrom Crystal Structure of Dna-Directed Rna Polymerase Subunit Alpha From Campylobacter Jejuni.

All present enzymatic activity of 2.17 Angstrom Crystal Structure of Dna-Directed Rna Polymerase Subunit Alpha From Campylobacter Jejuni.:
2.7.7.6;

Protein crystallography data

The structure of 2.17 Angstrom Crystal Structure of Dna-Directed Rna Polymerase Subunit Alpha From Campylobacter Jejuni., PDB code: 4noi was solved by G.Minasov, L.Shuvalova, I.Dubrovska, J.Winsor, S.Grimshaw, K.Kwon, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.49 / 2.17
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 99.173, 62.743, 93.621, 90.00, 112.52, 90.00
R / Rfree (%) 17.4 / 22.5

Other elements in 4noi:

The structure of 2.17 Angstrom Crystal Structure of Dna-Directed Rna Polymerase Subunit Alpha From Campylobacter Jejuni. also contains other interesting chemical elements:

Iodine (I) 4 atoms
Chlorine (Cl) 14 atoms

Sodium Binding Sites:

The binding sites of Sodium atom in the 2.17 Angstrom Crystal Structure of Dna-Directed Rna Polymerase Subunit Alpha From Campylobacter Jejuni. (pdb code 4noi). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the 2.17 Angstrom Crystal Structure of Dna-Directed Rna Polymerase Subunit Alpha From Campylobacter Jejuni., PDB code: 4noi:

Sodium binding site 1 out of 1 in 4noi

Go back to Sodium Binding Sites List in 4noi
Sodium binding site 1 out of 1 in the 2.17 Angstrom Crystal Structure of Dna-Directed Rna Polymerase Subunit Alpha From Campylobacter Jejuni.


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of 2.17 Angstrom Crystal Structure of Dna-Directed Rna Polymerase Subunit Alpha From Campylobacter Jejuni. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na401

b:53.8
occ:1.00
 O A:HOH555 2.4 48.5 1.0
O A:MSE71 2.4 43.0 1.0
O A:MSE74 2.4 40.6 1.0
O A:HOH554 2.5 43.0 1.0
O A:HOH528 2.5 52.5 1.0
O A:HOH527 2.8 47.7 1.0
C A:MSE71 3.4 46.8 1.0
C A:MSE74 3.6 38.1 1.0
N A:MSE74 3.9 48.2 1.0
CA A:ARG72 4.0 53.0 1.0
N A:ARG72 4.0 44.6 1.0
N A:MSE71 4.2 46.5 1.0
N A:GLY73 4.2 50.1 1.0
CA A:MSE74 4.3 44.2 1.0
CA A:MSE71 4.3 51.0 1.0
C A:ARG72 4.4 50.9 1.0
O A:GLU76 4.5 43.1 1.0
OD1 A:ASP77 4.5 54.3 1.0
O A:LEU75 4.6 41.2 1.0
O A:HOH548 4.6 56.0 1.0
N A:LEU75 4.6 39.2 1.0
CB A:MSE74 4.7 43.1 1.0
C A:LEU75 4.7 41.8 1.0
CA A:LEU75 4.9 44.5 1.0
C A:GLY73 4.9 55.2 1.0

Reference:

G.Minasov, L.Shuvalova, I.Dubrovska, J.Winsor, S.Grimshaw, K.Kwon, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid). 2.17 Angstrom Crystal Structure of Dna-Directed Rna Polymerase Subunit Alpha From Campylobacter Jejuni. To Be Published.
Page generated: Mon Oct 7 17:16:17 2024

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