Sodium in PDB 4jjd: Crystal Structure of the N114A Abl-SH3 Domain Mutant at PH4

All present enzymatic activity of Crystal Structure of the N114A Abl-SH3 Domain Mutant at PH4:
2.7.10.2;

The structure of Crystal Structure of the N114A Abl-SH3 Domain Mutant at PH4, PDB code: 4jjd was solved by A.Camara-Artigas, J.M.Martin-Garcia, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	17.10 / 1.60
Space group	C 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	43.246, 51.715, 39.917, 90.00, 90.00, 90.00
R / Rfree (%)	18.6 / 21.8

The binding sites of Sodium atom in the Crystal Structure of the N114A Abl-SH3 Domain Mutant at PH4 (pdb code 4jjd). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the Crystal Structure of the N114A Abl-SH3 Domain Mutant at PH4, PDB code: 4jjd:
Jump to Sodium binding site number: 1; 2;

Sodium binding site 1 out of 2 in the Crystal Structure of the N114A Abl-SH3 Domain Mutant at PH4


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of the N114A Abl-SH3 Domain Mutant at PH4 within 5.0Å range: probe atom residue distance (Å) B Occ A:Na202 b:14.1 occ:1.00 OG A:SER121 2.3 21.8 1.0 O A:HOH305 2.3 22.3 1.0 O A:HOH307 2.4 23.7 1.0 H A:SER121 3.3 27.6 1.0 CB A:SER121 3.4 17.6 1.0 HB3 A:SER121 3.6 21.1 1.0 N A:SER121 3.8 23.0 1.0 O A:HOH320 3.9 29.5 1.0 CA A:SER121 4.0 22.8 1.0 OXT A:SER121 4.0 20.3 1.0 O A:HOH301 4.1 17.6 1.0 HB2 A:SER121 4.2 21.1 1.0 O A:VAL119 4.2 15.8 1.0 C A:SER121 4.3 18.0 1.0 HA A:ASN120 4.6 16.9 1.0 C A:ASN120 4.7 19.2 1.0 HA A:SER121 5.0 27.3 1.0

Sodium binding site 2 out of 2 in the Crystal Structure of the N114A Abl-SH3 Domain Mutant at PH4


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of Crystal Structure of the N114A Abl-SH3 Domain Mutant at PH4 within 5.0Å range: probe atom residue distance (Å) B Occ A:Na203 b:12.0 occ:0.60 O A:PRO118 2.3 11.6 1.0 OG1 A:THR117 2.4 12.2 1.0 O A:HOH328 2.4 15.5 0.8 HG23 A:THR117 2.9 11.2 1.0 HG21 A:THR117 3.2 11.2 1.0 HD2 A:PRO118 3.3 9.2 1.0 CG2 A:THR117 3.3 9.4 1.0 CB A:THR117 3.4 10.3 1.0 C A:PRO118 3.4 12.6 1.0 N A:PRO118 3.6 9.2 1.0 C A:THR117 3.9 8.8 1.0 CD A:PRO118 3.9 7.7 1.0 HB2 A:PRO118 3.9 10.4 1.0 CA A:PRO118 4.1 7.5 1.0 HB A:THR117 4.1 12.3 1.0 CA A:THR117 4.2 8.0 1.0 HG22 A:THR117 4.3 11.2 1.0 HA A:VAL119 4.4 7.3 1.0 O A:ASN120 4.4 21.9 1.0 CB A:PRO118 4.4 8.7 1.0 O A:THR117 4.4 8.1 1.0 HA A:THR117 4.5 9.6 1.0 N A:VAL119 4.5 9.8 1.0 HD3 A:PRO118 4.7 9.2 1.0 O A:VAL119 4.7 15.8 1.0 CG A:PRO118 4.7 16.0 1.0 C A:VAL119 4.8 11.5 1.0 CA A:VAL119 4.8 6.1 1.0 HG2 A:PRO118 4.8 19.2 1.0 HB3 A:SER121 4.9 21.1 1.0 HA A:PRO118 5.0 9.0 1.0

A.Camara-Artigas, J.M.Martin-Garcia. Crystal Structure of the Abl-SH3 Domain at PH5 To Be Published.