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Sodium in PDB 4ijk: Crystal Structure of A Putative 3-Oxoacyl-[Acyl-Carrier Protein]Reductase From Helicobacter Pylori 26695

Enzymatic activity of Crystal Structure of A Putative 3-Oxoacyl-[Acyl-Carrier Protein]Reductase From Helicobacter Pylori 26695

All present enzymatic activity of Crystal Structure of A Putative 3-Oxoacyl-[Acyl-Carrier Protein]Reductase From Helicobacter Pylori 26695:
1.1.1.100;

Protein crystallography data

The structure of Crystal Structure of A Putative 3-Oxoacyl-[Acyl-Carrier Protein]Reductase From Helicobacter Pylori 26695, PDB code: 4ijk was solved by J.Hou, T.Osinski, H.Zheng, I.Shumilin, I.G.Shabalin, S.Shatsman, W.F.Anderson, W.Minor, Center For Structural Genomics Of Infectiousdiseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.96 / 2.54
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 127.168, 114.642, 69.501, 90.00, 90.00, 90.00
R / Rfree (%) 23.5 / 27.2

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of A Putative 3-Oxoacyl-[Acyl-Carrier Protein]Reductase From Helicobacter Pylori 26695 (pdb code 4ijk). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of A Putative 3-Oxoacyl-[Acyl-Carrier Protein]Reductase From Helicobacter Pylori 26695, PDB code: 4ijk:

Sodium binding site 1 out of 1 in 4ijk

Go back to Sodium Binding Sites List in 4ijk
Sodium binding site 1 out of 1 in the Crystal Structure of A Putative 3-Oxoacyl-[Acyl-Carrier Protein]Reductase From Helicobacter Pylori 26695


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of A Putative 3-Oxoacyl-[Acyl-Carrier Protein]Reductase From Helicobacter Pylori 26695 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Na301

b:21.3
occ:1.00
 O C:HOH329 2.3 23.6 1.0
O B:ASP229 2.3 14.6 1.0
O C:HOH328 2.5 6.7 1.0
OG B:SER232 2.5 14.7 1.0
C B:ASP229 3.3 14.6 1.0
CB B:SER232 3.5 14.6 1.0
OE2 C:GLU221 4.0 20.3 1.0
CB B:ASP229 4.0 15.2 1.0
N B:HIS230 4.2 14.6 1.0
CA B:ASP229 4.2 14.8 1.0
CG C:GLU218 4.3 18.6 1.0
CA B:HIS230 4.3 14.6 1.0
N B:SER232 4.4 14.2 1.0
OE2 C:GLU218 4.4 18.5 1.0
C B:HIS230 4.5 14.3 1.0
CA B:SER232 4.6 14.3 1.0
O B:HIS230 4.8 14.4 1.0
CD C:GLU218 4.9 18.7 1.0
CD C:GLU221 5.0 19.9 1.0

Reference:

J.Hou, T.Osinski, H.Zheng, I.Shumilin, I.G.Shabalin, S.Shatsman, W.F.Anderson, W.Minor, Center For Structural Genomics Of Infectious Diseases(Csgid). Crystal Structure of A Putative 3-Oxoacyl-[Acyl-Carrier Protein]Reductase From Helicobacter Pylori 26695 To Be Published.
Page generated: Mon Oct 7 16:01:36 2024

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