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Sodium in PDB 4ew7: The Crystal Structure of Conjugative Transfer PAS_LIKE Domain From Salmonella Enterica Subsp. Enterica Serovar Typhimurium

Protein crystallography data

The structure of The Crystal Structure of Conjugative Transfer PAS_LIKE Domain From Salmonella Enterica Subsp. Enterica Serovar Typhimurium, PDB code: 4ew7 was solved by R.Wu, R.P.Jedrzejczak, R.N.Brown, J.R.Cort, F.Heffron, E.S.Nakayasu, J.N.Adkins, A.Joachimiak, Midwest Center For Structural Genomics(Mcsg), Program For The Characterization Of Secreted Effectorproteins (Pcsep), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.91 / 1.67
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 57.081, 57.081, 67.638, 90.00, 90.00, 120.00
R / Rfree (%) 19.5 / 22.8

Other elements in 4ew7:

The structure of The Crystal Structure of Conjugative Transfer PAS_LIKE Domain From Salmonella Enterica Subsp. Enterica Serovar Typhimurium also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Sodium Binding Sites:

The binding sites of Sodium atom in the The Crystal Structure of Conjugative Transfer PAS_LIKE Domain From Salmonella Enterica Subsp. Enterica Serovar Typhimurium (pdb code 4ew7). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the The Crystal Structure of Conjugative Transfer PAS_LIKE Domain From Salmonella Enterica Subsp. Enterica Serovar Typhimurium, PDB code: 4ew7:

Sodium binding site 1 out of 1 in 4ew7

Go back to Sodium Binding Sites List in 4ew7
Sodium binding site 1 out of 1 in the The Crystal Structure of Conjugative Transfer PAS_LIKE Domain From Salmonella Enterica Subsp. Enterica Serovar Typhimurium


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of The Crystal Structure of Conjugative Transfer PAS_LIKE Domain From Salmonella Enterica Subsp. Enterica Serovar Typhimurium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na204

b:58.3
occ:1.00
O A:SER84 2.2 48.6 1.0
C A:SER84 3.2 44.0 1.0
N A:GLY86 3.3 36.8 1.0
C A:LEU85 3.3 42.0 1.0
CA A:GLY86 3.6 35.8 1.0
O A:HOH334 3.6 44.8 1.0
O A:LEU85 3.7 38.2 1.0
CA A:LEU85 3.9 40.8 1.0
N A:LEU85 3.9 39.3 1.0
CA A:SER84 4.3 37.6 1.0
O A:GLN83 4.6 34.7 1.0

Reference:

R.Wu, R.P.Jedrzejczak, R.N.Brown, J.R.Cort, F.Heffron, E.S.Nakayasu, J.N.Adkins, A.Joachimiak. The Crystal Structure of Conjugative Transfer PAS_LIKE Domain From Salmonella Enterica Subsp. Enterica Serovar Typhimurium To Be Published.
Page generated: Mon Oct 7 15:13:33 2024

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