Sodium in PDB 3rwg: Rhesus Macaque Mhc Class I Molecule Mamu-B*17-MW9

The structure of Rhesus Macaque Mhc Class I Molecule Mamu-B*17-MW9, PDB code: 3rwg was solved by Y.Wu, F.Gao, J.Liu, J.X.Qi, D.A.Price, G.F.Gao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 2.10
Space group	P 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	68.018, 44.419, 79.517, 90.00, 96.33, 90.00
R / Rfree (%)	19 / 23.7

The binding sites of Sodium atom in the Rhesus Macaque Mhc Class I Molecule Mamu-B*17-MW9 (pdb code 3rwg). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Rhesus Macaque Mhc Class I Molecule Mamu-B*17-MW9, PDB code: 3rwg:

Sodium binding site 1 out of 1 in the Rhesus Macaque Mhc Class I Molecule Mamu-B*17-MW9


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Rhesus Macaque Mhc Class I Molecule Mamu-B*17-MW9 within 5.0Å range: probe atom residue distance (Å) B Occ A:Na278 b:44.4 occ:1.00 O A:HOH320 2.3 31.7 1.0 O16 A:XPE277 2.4 56.1 1.0 O4 A:XPE277 2.5 41.5 1.0 O7 A:XPE277 2.7 44.0 1.0 O13 A:XPE277 2.8 49.0 1.0 O10 A:XPE277 2.8 45.7 1.0 O1 A:XPE277 3.3 42.9 1.0 C17 A:XPE277 3.3 56.9 1.0 C15 A:XPE277 3.3 53.6 1.0 C2 A:XPE277 3.5 40.7 1.0 C9 A:XPE277 3.5 44.9 1.0 C3 A:XPE277 3.5 41.6 1.0 C14 A:XPE277 3.6 52.0 1.0 C6 A:XPE277 3.6 42.3 1.0 C5 A:XPE277 3.6 42.1 1.0 C11 A:XPE277 3.6 47.0 1.0 C8 A:XPE277 3.6 44.2 1.0 C12 A:XPE277 3.7 48.2 1.0 C18 A:XPE277 3.7 56.9 1.0 OE1 A:GLU166 4.3 40.1 0.5 OE1 A:GLU166 4.6 40.1 0.5

Y.Wu, F.Gao, J.Liu, J.X.Qi, E.Gostick, D.A.Price, G.F.Gao. Structural Basis of Diverse Peptide Accommodation By the Rhesus Macaque Mhc Class I Molecule Mamu-B*17: Insights Into Immune Protection From Simian Immunodeficiency Virus J.Immunol. V. 187 6382 2011.
ISSN: ISSN 0022-1767
PubMed: 22084443
DOI: 10.4049/JIMMUNOL.1101726