Atomistry » Sodium » PDB 3rnx-3si4 » 3ruh
Atomistry »
  Sodium »
    PDB 3rnx-3si4 »
      3ruh »

Sodium in PDB 3ruh: Alternative Analogs As Viable Substrates of Udp-Hexose 4-Epimerases

Protein crystallography data

The structure of Alternative Analogs As Viable Substrates of Udp-Hexose 4-Epimerases, PDB code: 3ruh was solved by V.S.Bhatt, W.Guan, P.G.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 73.53 / 2.88
Space group P 32
Cell size a, b, c (Å), α, β, γ (°) 76.612, 76.612, 220.600, 90.00, 90.00, 120.00
R / Rfree (%) 21 / 26.8

Sodium Binding Sites:

The binding sites of Sodium atom in the Alternative Analogs As Viable Substrates of Udp-Hexose 4-Epimerases (pdb code 3ruh). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Alternative Analogs As Viable Substrates of Udp-Hexose 4-Epimerases, PDB code: 3ruh:

Sodium binding site 1 out of 1 in 3ruh

Go back to Sodium Binding Sites List in 3ruh
Sodium binding site 1 out of 1 in the Alternative Analogs As Viable Substrates of Udp-Hexose 4-Epimerases


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Alternative Analogs As Viable Substrates of Udp-Hexose 4-Epimerases within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na348

b:22.2
occ:1.00
N A:LYS187 3.9 24.9 1.0
O A:GLN135 4.1 26.5 1.0
O A:LYS187 4.1 23.1 1.0
O A:GLY185 4.3 28.5 1.0
CD1 A:PHE186 4.4 22.7 1.0
CA A:PHE186 4.6 25.4 1.0
CB A:LYS187 4.6 25.9 1.0
O A:VAL134 4.6 26.3 1.0
CA A:LYS187 4.7 24.6 1.0
C A:PHE186 4.7 24.6 1.0
NZ A:LYS257 4.7 27.2 1.0
CE1 A:PHE186 4.8 21.8 1.0
C A:LYS187 4.8 23.2 1.0
OD2 A:ASP254 4.9 33.7 1.0
C A:GLN135 5.0 25.7 1.0

Reference:

V.S.Bhatt, W.Guan, P.G.Wang. Alternative Analogs As Viable Substrates of Udp-Hexose 4-Epimerases To Be Published.
Page generated: Sun Aug 17 17:18:19 2025

Last articles

Na in 6BHD
Na in 6BGK
Na in 6BG0
Na in 6BGQ
Na in 6BG1
Na in 6BAQ
Na in 6BFO
Na in 6BFK
Na in 6BEM
Na in 6BEL
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy