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Sodium in PDB 3qvx: L-Myo-Inositol 1-Phosphate Synthase From Archaeoglobus Fulgidus Mutant K367A

Enzymatic activity of L-Myo-Inositol 1-Phosphate Synthase From Archaeoglobus Fulgidus Mutant K367A

All present enzymatic activity of L-Myo-Inositol 1-Phosphate Synthase From Archaeoglobus Fulgidus Mutant K367A:
5.5.1.4;

Protein crystallography data

The structure of L-Myo-Inositol 1-Phosphate Synthase From Archaeoglobus Fulgidus Mutant K367A, PDB code: 3qvx was solved by K.Neelon, M.F.Roberts, B.Stec, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 68.04 / 1.90
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 82.070, 89.280, 104.970, 90.00, 90.00, 90.00
R / Rfree (%) 17.5 / 22.9

Sodium Binding Sites:

The binding sites of Sodium atom in the L-Myo-Inositol 1-Phosphate Synthase From Archaeoglobus Fulgidus Mutant K367A (pdb code 3qvx). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the L-Myo-Inositol 1-Phosphate Synthase From Archaeoglobus Fulgidus Mutant K367A, PDB code: 3qvx:

Sodium binding site 1 out of 1 in 3qvx

Go back to Sodium Binding Sites List in 3qvx
Sodium binding site 1 out of 1 in the L-Myo-Inositol 1-Phosphate Synthase From Archaeoglobus Fulgidus Mutant K367A


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of L-Myo-Inositol 1-Phosphate Synthase From Archaeoglobus Fulgidus Mutant K367A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na410

b:22.1
occ:0.50
OD2 A:ASP329 2.6 13.7 1.0
CG A:ASP329 3.6 13.3 1.0
CB A:ASP329 4.1 13.3 1.0
O A:HOH432 4.2 35.4 1.0
OD1 A:ASP329 4.7 16.8 1.0

Reference:

K.Neelon, M.F.Roberts, B.Stec. Atomic Crowding Drives the Catalysis of Myo-Inositol Phosphate Synthase, As Deduced From A Crystal Structure of A Trapped Catalytic Intermediate To Be Published.
Page generated: Mon Oct 7 12:43:05 2024

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