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Sodium in PDB 3j7t: Calcium Atpase Structure with Two Bound Calcium Ions Determined By Electron Crystallography of Thin 3D Crystals

Enzymatic activity of Calcium Atpase Structure with Two Bound Calcium Ions Determined By Electron Crystallography of Thin 3D Crystals

All present enzymatic activity of Calcium Atpase Structure with Two Bound Calcium Ions Determined By Electron Crystallography of Thin 3D Crystals:
3.6.3.8;

Other elements in 3j7t:

The structure of Calcium Atpase Structure with Two Bound Calcium Ions Determined By Electron Crystallography of Thin 3D Crystals also contains other interesting chemical elements:

Calcium (Ca) 2 atoms

Sodium Binding Sites:

The binding sites of Sodium atom in the Calcium Atpase Structure with Two Bound Calcium Ions Determined By Electron Crystallography of Thin 3D Crystals (pdb code 3j7t). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Calcium Atpase Structure with Two Bound Calcium Ions Determined By Electron Crystallography of Thin 3D Crystals, PDB code: 3j7t:

Sodium binding site 1 out of 1 in 3j7t

Go back to Sodium Binding Sites List in 3j7t
Sodium binding site 1 out of 1 in the Calcium Atpase Structure with Two Bound Calcium Ions Determined By Electron Crystallography of Thin 3D Crystals


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Calcium Atpase Structure with Two Bound Calcium Ions Determined By Electron Crystallography of Thin 3D Crystals within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na1003

b:20.0
occ:1.00
 OE1 A:GLU732 2.3 20.0 1.0
O A:ALA714 2.3 20.0 1.0
O A:LEU711 2.4 20.0 1.0
O A:LYS712 2.8 20.0 1.0
OE2 A:GLU732 2.9 20.0 1.0
CD A:GLU732 2.9 20.0 1.0
C A:LYS712 3.2 20.0 1.0
C A:ALA714 3.5 20.0 1.0
C A:LEU711 3.5 20.0 1.0
CA A:LYS712 3.6 20.0 1.0
O A:GLU715 4.0 20.0 1.0
N A:GLY717 4.0 20.0 1.0
N A:LYS712 4.0 20.0 1.0
N A:ALA714 4.1 20.0 1.0
N A:LYS713 4.2 20.0 1.0
C A:GLU715 4.2 20.0 1.0
CG A:GLU732 4.3 20.0 1.0
C A:LYS713 4.3 20.0 1.0
CA A:ALA714 4.3 20.0 1.0
N A:GLU715 4.4 20.0 1.0
O A:ALA730 4.4 20.0 1.0
CA A:GLU715 4.5 20.0 1.0
O A:HOH1189 4.6 24.7 1.0
CA A:GLY717 4.6 20.0 1.0
O A:LYS713 4.7 20.0 1.0
CA A:LYS713 4.8 20.0 1.0
CA A:LEU711 4.8 20.0 1.0
N A:ILE716 4.8 20.0 1.0
CB A:ALA714 4.9 20.0 1.0
CB A:LYS712 4.9 20.0 1.0

Reference:

K.Yonekura, K.Kato, M.Ogasawara, M.Tomita, C.Toyoshima. Electron Crystallography of Ultra-Thin 3D Protein Crystals: Atomic Model with Charges Proc.Natl.Acad.Sci.Usa 2015.
ISSN: ESSN 1091-6490
Page generated: Sun Aug 17 15:51:57 2025

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