Sodium in PDB 3gbv: Crystal Structure of A Putative Laci Transcriptional Regulator From Bacteroides Fragilis

The structure of Crystal Structure of A Putative Laci Transcriptional Regulator From Bacteroides Fragilis, PDB code: 3gbv was solved by B.Syed Ibrahim, D.Kumaran, S.K.Burley, S.Swaminathan, New York Sgxresearch Center For Structural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	23.58 / 2.20
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	43.976, 240.568, 119.214, 90.00, 90.00, 90.00
R / Rfree (%)	21 / 24

The binding sites of Sodium atom in the Crystal Structure of A Putative Laci Transcriptional Regulator From Bacteroides Fragilis (pdb code 3gbv). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of A Putative Laci Transcriptional Regulator From Bacteroides Fragilis, PDB code: 3gbv:

Sodium binding site 1 out of 1 in the Crystal Structure of A Putative Laci Transcriptional Regulator From Bacteroides Fragilis


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of A Putative Laci Transcriptional Regulator From Bacteroides Fragilis within 5.0Å range: probe atom residue distance (Å) B Occ B:Na1 b:32.1 occ:1.00 O B:LYS200 2.4 32.0 1.0 O B:ILE206 2.4 27.7 1.0 OH B:TYR110 2.6 28.3 1.0 OE1 B:GLN211 2.8 29.5 1.0 O2 B:EDO364 2.8 39.4 1.0 C B:LYS200 3.4 31.7 1.0 C B:ILE206 3.5 27.1 1.0 CB B:LYS200 3.5 30.8 1.0 CD B:GLN211 3.6 28.4 1.0 CZ B:TYR110 3.6 26.8 1.0 NE2 B:GLN211 3.7 27.4 1.0 O B:HOH15 3.7 32.7 1.0 CG1 B:ILE206 3.8 34.2 1.0 CE1 B:TYR110 3.9 27.8 1.0 CA B:LYS200 4.0 30.0 1.0 C2 B:EDO364 4.0 43.5 1.0 CA B:ILE206 4.1 30.9 1.0 N B:LYS200 4.3 27.7 1.0 N B:ILE201 4.5 32.4 1.0 N B:GLY207 4.6 26.3 1.0 CB B:ILE206 4.6 32.3 1.0 CE2 B:TYR110 4.8 26.6 1.0 CB B:ASN265 4.8 21.6 1.0 CA B:ILE201 4.9 33.4 1.0 CA B:GLY207 4.9 25.7 1.0 CG B:LYS200 4.9 31.1 1.0 C B:GLY207 5.0 25.2 1.0 CG B:GLN211 5.0 28.2 1.0

B.Syed Ibrahim, D.Kumaran, S.K.Burley, S.Swaminathan. Crystal Structure of A Putative Laci Transcriptional Regulator From Bacteroides Fragilis To Be Published.