Sodium in PDB 2xz8: Crystal Structure of the Lfw Ectodomain of the Peptidoglycan Recognition Protein Lf

The structure of Crystal Structure of the Lfw Ectodomain of the Peptidoglycan Recognition Protein Lf, PDB code: 2xz8 was solved by N.Basbous, F.Coste, P.Leone, R.Vincentelli, J.Royet, C.Kellenberger, A.Roussel, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	35.611 / 1.94
Space group	P 65 2 2
Cell size a, b, c (Å), α, β, γ (°)	82.240, 82.240, 178.620, 90.00, 90.00, 120.00
R / Rfree (%)	17.35 / 20.96

The binding sites of Sodium atom in the Crystal Structure of the Lfw Ectodomain of the Peptidoglycan Recognition Protein Lf (pdb code 2xz8). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of the Lfw Ectodomain of the Peptidoglycan Recognition Protein Lf, PDB code: 2xz8:

Sodium binding site 1 out of 1 in the Crystal Structure of the Lfw Ectodomain of the Peptidoglycan Recognition Protein Lf


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of the Lfw Ectodomain of the Peptidoglycan Recognition Protein Lf within 5.0Å range: probe atom residue distance (Å) B Occ B:Na1368 b:37.0 occ:0.50 OG B:SER291 3.1 59.1 1.0 CB B:SER291 3.9 42.7 1.0 CA B:SER291 4.1 33.6 1.0 N B:SER291 4.7 27.4 1.0 CG B:GLU290 4.8 27.6 1.0 O B:GLU290 4.9 28.0 1.0

N.Basbous, F.Coste, P.Leone, R.Vincentelli, J.Royet, C.Kellenberger, A.Roussel. The Drosophila Peptidoglycan-Recognition Protein Lf Interacts with Peptidoglycan-Recognition Protein Lc to Downregulate the Imd Pathway. Embo Rep. V. 12 327 2011.
ISSN: ISSN 1469-221X
PubMed: 21372849
DOI: 10.1038/EMBOR.2011.19