Sodium in PDB 2xkl: Crystal Structure of Mouse Apolipoprotein M

The structure of Crystal Structure of Mouse Apolipoprotein M, PDB code: 2xkl was solved by M.Sevvana, K.Kassler, A.Josefin, S.Weiler, B.Dahlback, H.Sticht, Y.A.Muller, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.94 / 2.50
Space group	P 65 2 2
Cell size a, b, c (Å), α, β, γ (°)	53.930, 53.930, 207.480, 90.00, 90.00, 120.00
R / Rfree (%)	18.731 / 24.73

The binding sites of Sodium atom in the Crystal Structure of Mouse Apolipoprotein M (pdb code 2xkl). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Mouse Apolipoprotein M, PDB code: 2xkl:

Sodium binding site 1 out of 1 in the Crystal Structure of Mouse Apolipoprotein M


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Mouse Apolipoprotein M within 5.0Å range: probe atom residue distance (Å) B Occ A:Na1193 b:39.6 occ:1.00 SG A:CYS169 2.4 25.9 1.0 CB A:CYS169 3.6 20.1 1.0 CA A:CYS169 4.1 19.6 1.0 O A:HOH2073 4.4 25.6 1.0 O A:CYS169 4.7 19.3 1.0 C A:CYS169 4.8 18.8 1.0

M.Sevvana, K.Kassler, J.Ahnstrom, S.Weiler, B.Dahlback, H.Sticht, Y.A.Muller. Mouse Apom Displays An Unprecedented Seven- Stranded Lipocalin Fold: Folding Decoy or Alternative Native Fold? J.Mol.Biol. V. 404 363 2010.
ISSN: ISSN 0022-2836
PubMed: 20932978
DOI: 10.1016/J.JMB.2010.09.062