Atomistry » Sodium » PDB 2gum-2hti » 2gvh
Atomistry »
  Sodium »
    PDB 2gum-2hti »
      2gvh »

Sodium in PDB 2gvh: Crystal Structure of Acyl-Coa Hydrolase (15159470) From Agrobacterium Tumefaciens at 2.65 A Resolution

Enzymatic activity of Crystal Structure of Acyl-Coa Hydrolase (15159470) From Agrobacterium Tumefaciens at 2.65 A Resolution

All present enzymatic activity of Crystal Structure of Acyl-Coa Hydrolase (15159470) From Agrobacterium Tumefaciens at 2.65 A Resolution:
3.1.2.20;

Protein crystallography data

The structure of Crystal Structure of Acyl-Coa Hydrolase (15159470) From Agrobacterium Tumefaciens at 2.65 A Resolution, PDB code: 2gvh was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.71 / 2.50
Space group P 43
Cell size a, b, c (Å), α, β, γ (°) 121.209, 121.209, 81.844, 90.00, 90.00, 90.00
R / Rfree (%) 22.6 / 24.4

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of Acyl-Coa Hydrolase (15159470) From Agrobacterium Tumefaciens at 2.65 A Resolution (pdb code 2gvh). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Acyl-Coa Hydrolase (15159470) From Agrobacterium Tumefaciens at 2.65 A Resolution, PDB code: 2gvh:

Sodium binding site 1 out of 1 in 2gvh

Go back to Sodium Binding Sites List in 2gvh
Sodium binding site 1 out of 1 in the Crystal Structure of Acyl-Coa Hydrolase (15159470) From Agrobacterium Tumefaciens at 2.65 A Resolution


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Acyl-Coa Hydrolase (15159470) From Agrobacterium Tumefaciens at 2.65 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Na277

b:81.4
occ:1.00
 OD2 B:ASP157 2.2 91.7 1.0
OD2 C:ASP157 2.2 91.8 1.0
OD2 A:ASP157 2.6 91.8 1.0
CG C:ASP157 3.3 81.7 1.0
CG B:ASP157 3.4 81.7 1.0
CG A:ASP157 3.6 81.7 1.0
CB C:ASP157 3.9 74.2 1.0
CB B:ASP157 4.1 74.1 1.0
CB A:ASP157 4.2 74.4 1.0
OD1 B:ASP157 4.2 72.9 1.0
OD1 C:ASP157 4.3 72.5 1.0
OD1 A:ASP157 4.4 72.6 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Mon Oct 7 02:43:11 2024

Last articles

Ca in 5MC9
Ca in 5MA7
Ca in 5M86
Ca in 5M9W
Ca in 5M8G
Ca in 5M99
Ca in 5M8D
Ca in 5M8E
Ca in 5M7G
Ca in 5M6C
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy