Sodium in PDB 1ob7: Cephaibol C

The structure of Cephaibol C, PDB code: 1ob7 was solved by G.Bunkoczi, M.Schiell, L.Vertesy, G.M.Sheldrick, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	28.62 / 0.89
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	9.002, 28.619, 41.100, 90.00, 90.00, 90.00
R / Rfree (%)	7.2 / 7.7

The binding sites of Sodium atom in the Cephaibol C (pdb code 1ob7). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Cephaibol C, PDB code: 1ob7:

Sodium binding site 1 out of 1 in the Cephaibol C


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Cephaibol C within 5.0Å range: probe atom residue distance (Å) B Occ A:Na20 b:5.3 occ:0.54 OE1 A:GLN11 2.8 3.3 1.0 O A:HYP10 2.9 3.1 1.0 CD A:GLN11 3.5 2.7 1.0 C A:HYP10 3.7 2.5 1.0 NE2 A:GLN11 3.8 2.8 1.0 CA A:GLN11 4.1 2.5 1.0 N A:GLN11 4.3 2.2 1.0 CB A:HYP10 4.7 2.3 1.0 CG A:GLN11 4.7 2.5 1.0 CA A:HYP10 4.8 2.3 1.0 CB A:GLN11 4.8 2.7 1.0

G.Bunkoczi, M.Schiell, L.Vertesy, G.M.Sheldrick. Crystal Structures of Cephaibols J.Pept.Sci. V. 9 745 2003.
ISSN: ISSN 1075-2617
PubMed: 14658793
DOI: 10.1002/PSC.496